Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LIMK2P53671 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LIMK2P53671 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LIMK2P53671 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.27■□□□□ 0.68
LIMK2P53671 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LIMK2P53671 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 AC113410.3-201ENST00000623366 203 ntBASIC19.27■□□□□ 0.68
LIMK2P53671 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
LIMK2P53671 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LIMK2P53671 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LIMK2P53671 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LIMK2P53671 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LIMK2P53671 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.27■□□□□ 0.67
LIMK2P53671 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LIMK2P53671 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.26■□□□□ 0.67
LIMK2P53671 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LIMK2P53671 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LIMK2P53671 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.26■□□□□ 0.67
LIMK2P53671 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LIMK2P53671 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LIMK2P53671 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.26■□□□□ 0.67
LIMK2P53671 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LIMK2P53671 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.26■□□□□ 0.67
LIMK2P53671 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.26■□□□□ 0.67
LIMK2P53671 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.26■□□□□ 0.67
LIMK2P53671 MIR4785-201ENST00000585005 73 ntBASIC19.26■□□□□ 0.67
LIMK2P53671 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.26■□□□□ 0.67
LIMK2P53671 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LIMK2P53671 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.26■□□□□ 0.67
LIMK2P53671 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.26■□□□□ 0.67
LIMK2P53671 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LIMK2P53671 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.26■□□□□ 0.67
LIMK2P53671 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LIMK2P53671 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LIMK2P53671 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.25■□□□□ 0.67
LIMK2P53671 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
LIMK2P53671 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
LIMK2P53671 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.25■□□□□ 0.67
LIMK2P53671 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.25■□□□□ 0.67
LIMK2P53671 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.25■□□□□ 0.67
LIMK2P53671 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.25■□□□□ 0.67
LIMK2P53671 BX088651.1-201ENST00000540551 451 ntBASIC19.25■□□□□ 0.67
LIMK2P53671 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.25■□□□□ 0.67
LIMK2P53671 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.25■□□□□ 0.67
LIMK2P53671 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIMK2P53671 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LIMK2P53671 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 AC211429.1-201ENST00000415277 523 ntBASIC19.24■□□□□ 0.67
LIMK2P53671 ECEL1P3-201ENST00000427961 737 ntBASIC19.24■□□□□ 0.67
LIMK2P53671 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LIMK2P53671 KRT18P16-201ENST00000510337 1294 ntBASIC19.24■□□□□ 0.67
LIMK2P53671 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.24■□□□□ 0.67
LIMK2P53671 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.24■□□□□ 0.67
LIMK2P53671 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LIMK2P53671 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.24■□□□□ 0.67
LIMK2P53671 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms