Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX2P50458 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX2P50458 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX2P50458 RNF165-205ENST00000588679 2904 ntBASIC17.08■□□□□ 0.32
LHX2P50458 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LHX2P50458 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX2P50458 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX2P50458 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX2P50458 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX2P50458 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX2P50458 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX2P50458 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX2P50458 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.07■□□□□ 0.32
LHX2P50458 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX2P50458 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX2P50458 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX2P50458 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX2P50458 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX2P50458 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LHX2P50458 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
LHX2P50458 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX2P50458 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX2P50458 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX2P50458 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LHX2P50458 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX2P50458 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.07■□□□□ 0.32
LHX2P50458 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LHX2P50458 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX2P50458 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LHX2P50458 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX2P50458 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LHX2P50458 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX2P50458 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
LHX2P50458 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX2P50458 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
LHX2P50458 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
LHX2P50458 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LHX2P50458 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX2P50458 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LHX2P50458 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX2P50458 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LHX2P50458 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX2P50458 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX2P50458 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX2P50458 AC093484.2-201ENST00000580996 2166 ntBASIC17.05■□□□□ 0.32
LHX2P50458 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LHX2P50458 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
LHX2P50458 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX2P50458 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX2P50458 MIR1224-201ENST00000408193 85 ntBASIC17.05■□□□□ 0.32
LHX2P50458 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX2P50458 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.05■□□□□ 0.32
LHX2P50458 AL138966.2-201ENST00000621997 464 ntBASIC17.05■□□□□ 0.32
LHX2P50458 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX2P50458 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms