Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.12□□□□□ -0.47
UBE2AP49459 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.12□□□□□ -0.47
UBE2AP49459 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.12□□□□□ -0.47
UBE2AP49459 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.12□□□□□ -0.47
UBE2AP49459 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 TREX1-205ENST00000625293 1783 ntBASIC12.12□□□□□ -0.47
UBE2AP49459 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 AC073210.2-201ENST00000430369 194 ntBASIC12.11□□□□□ -0.47
UBE2AP49459 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2AP49459 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 RPS2P52-201ENST00000469610 820 ntBASIC12.11□□□□□ -0.47
UBE2AP49459 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.11□□□□□ -0.47
UBE2AP49459 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2AP49459 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2AP49459 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2AP49459 HLA-B-256ENST00000639848 1089 ntBASIC12.11□□□□□ -0.47
UBE2AP49459 AC133041.1-202ENST00000642053 222 ntBASIC12.11□□□□□ -0.47
UBE2AP49459 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
UBE2AP49459 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
UBE2AP49459 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2AP49459 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2AP49459 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
UBE2AP49459 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
UBE2AP49459 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.1□□□□□ -0.47
UBE2AP49459 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
UBE2AP49459 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
UBE2AP49459 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.1□□□□□ -0.47
UBE2AP49459 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBE2AP49459 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.1□□□□□ -0.47
UBE2AP49459 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms