Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
SLC1A1P43005 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.02■□□□□ 0.8
SLC1A1P43005 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A1P43005 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SLC1A1P43005 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC1A1P43005 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC1A1P43005 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC1A1P43005 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.01■□□□□ 0.79
SLC1A1P43005 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC1A1P43005 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC1A1P43005 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A1P43005 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC1A1P43005 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A1P43005 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC1A1P43005 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A1P43005 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC1A1P43005 AC083906.6-201ENST00000641366 219 ntBASIC20.01■□□□□ 0.79
SLC1A1P43005 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A1P43005 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC1A1P43005 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A1P43005 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20■□□□□ 0.79
SLC1A1P43005 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
SLC1A1P43005 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20■□□□□ 0.79
SLC1A1P43005 RNA5SP413-201ENST00000516373 109 ntBASIC20■□□□□ 0.79
SLC1A1P43005 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20■□□□□ 0.79
SLC1A1P43005 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A1P43005 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC1A1P43005 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.99■□□□□ 0.79
SLC1A1P43005 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
SLC1A1P43005 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.99■□□□□ 0.79
SLC1A1P43005 TSPY23P-201ENST00000440136 739 ntBASIC19.99■□□□□ 0.79
SLC1A1P43005 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC1A1P43005 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A1P43005 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A1P43005 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SLC1A1P43005 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SLC1A1P43005 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
SLC1A1P43005 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC1A1P43005 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 ID1-201ENST00000376105 1233 ntBASIC19.98■□□□□ 0.79
SLC1A1P43005 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC1A1P43005 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC1A1P43005 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SLC1A1P43005 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms