Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 AC008764.7-201ENST00000593779 1081 ntBASIC13.19□□□□□ -0.3
RPL13AP40429 AL136967.2-201ENST00000623968 743 ntBASIC13.19□□□□□ -0.3
RPL13AP40429 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.19□□□□□ -0.3
RPL13AP40429 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.18□□□□□ -0.3
RPL13AP40429 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.18□□□□□ -0.3
RPL13AP40429 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 AL031432.3-201ENST00000607698 485 ntBASIC13.18□□□□□ -0.3
RPL13AP40429 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RPL13AP40429 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.18□□□□□ -0.3
RPL13AP40429 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 AC009113.1-201ENST00000570267 2443 ntBASIC13.18□□□□□ -0.3
RPL13AP40429 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPL13AP40429 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RPL13AP40429 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RPL13AP40429 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 AC067930.6-201ENST00000623257 4947 ntBASIC13.17□□□□□ -0.3
RPL13AP40429 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 MIR935-201ENST00000401179 91 ntBASIC13.17□□□□□ -0.3
RPL13AP40429 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 AC099791.1-201ENST00000416440 715 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms