Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
GDNFP39905 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GDNFP39905 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.64■□□□□ 0.25
GDNFP39905 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 AL512625.2-201ENST00000417533 625 ntBASIC16.64■□□□□ 0.25
GDNFP39905 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 AC006970.2-201ENST00000450065 779 ntBASIC16.64■□□□□ 0.25
GDNFP39905 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.64■□□□□ 0.25
GDNFP39905 AF201337.1-201ENST00000520239 748 ntBASIC16.64■□□□□ 0.25
GDNFP39905 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.64■□□□□ 0.25
GDNFP39905 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.64■□□□□ 0.25
GDNFP39905 AL031963.3-201ENST00000606441 850 ntBASIC16.64■□□□□ 0.25
GDNFP39905 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.64■□□□□ 0.25
GDNFP39905 AC105020.6-201ENST00000621523 1217 ntBASIC16.64■□□□□ 0.25
GDNFP39905 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.64■□□□□ 0.25
GDNFP39905 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.64■□□□□ 0.25
GDNFP39905 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GDNFP39905 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.64■□□□□ 0.25
GDNFP39905 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDNFP39905 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
GDNFP39905 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.63■□□□□ 0.25
GDNFP39905 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.63■□□□□ 0.25
GDNFP39905 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GDNFP39905 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.63■□□□□ 0.25
GDNFP39905 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.63■□□□□ 0.25
GDNFP39905 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
GDNFP39905 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GDNFP39905 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GDNFP39905 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDNFP39905 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
GDNFP39905 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.62■□□□□ 0.25
GDNFP39905 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.62■□□□□ 0.25
GDNFP39905 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.62■□□□□ 0.25
GDNFP39905 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.62■□□□□ 0.25
GDNFP39905 AC083906.2-201ENST00000511578 360 ntBASIC16.62■□□□□ 0.25
GDNFP39905 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GDNFP39905 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GDNFP39905 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GDNFP39905 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms