Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.18■□□□□ 0.82
CHKAP35790 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHKAP35790 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.17■□□□□ 0.82
CHKAP35790 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 AC211429.1-201ENST00000415277 523 ntBASIC20.17■□□□□ 0.82
CHKAP35790 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.17■□□□□ 0.82
CHKAP35790 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.17■□□□□ 0.82
CHKAP35790 AC026271.3-201ENST00000571884 352 ntBASIC20.17■□□□□ 0.82
CHKAP35790 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.17■□□□□ 0.82
CHKAP35790 LINC01023-201ENST00000606054 436 ntBASIC20.17■□□□□ 0.82
CHKAP35790 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CHKAP35790 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CHKAP35790 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CHKAP35790 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CHKAP35790 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHKAP35790 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHKAP35790 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CHKAP35790 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.16■□□□□ 0.82
CHKAP35790 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
CHKAP35790 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.16■□□□□ 0.82
CHKAP35790 AC131212.4-201ENST00000623606 975 ntBASIC20.16■□□□□ 0.82
CHKAP35790 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.16■□□□□ 0.82
CHKAP35790 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.16■□□□□ 0.82
CHKAP35790 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 KRT8P8-201ENST00000434750 1448 ntBASIC20.16■□□□□ 0.82
CHKAP35790 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.16■□□□□ 0.82
CHKAP35790 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
CHKAP35790 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CHKAP35790 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHKAP35790 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.15■□□□□ 0.82
CHKAP35790 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHKAP35790 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CHKAP35790 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.15■□□□□ 0.82
CHKAP35790 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 MMP23A-201ENST00000234610 1017 ntBASIC20.15■□□□□ 0.82
CHKAP35790 AC087499.1-201ENST00000418141 1075 ntBASIC20.15■□□□□ 0.82
CHKAP35790 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.15■□□□□ 0.82
CHKAP35790 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.15■□□□□ 0.82
CHKAP35790 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CHKAP35790 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.15■□□□□ 0.82
CHKAP35790 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 FSCN1P1-201ENST00000568912 1481 ntBASIC20.15■□□□□ 0.82
CHKAP35790 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.15■□□□□ 0.82
CHKAP35790 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.15■□□□□ 0.82
CHKAP35790 LINC01465-201ENST00000408887 1940 ntBASIC20.15■□□□□ 0.82
CHKAP35790 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHKAP35790 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHKAP35790 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CHKAP35790 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CHKAP35790 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.14■□□□□ 0.81
CHKAP35790 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.14■□□□□ 0.81
CHKAP35790 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
CHKAP35790 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.14■□□□□ 0.81
CHKAP35790 RBM17P1-201ENST00000453646 1190 ntBASIC20.14■□□□□ 0.81
CHKAP35790 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.14■□□□□ 0.81
CHKAP35790 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.14■□□□□ 0.81
CHKAP35790 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CHKAP35790 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHKAP35790 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.13■□□□□ 0.81
CHKAP35790 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHKAP35790 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms