Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN1P35523 AC231657.2-201ENST00000624556 255 ntBASIC21.71■■□□□ 1.07
CLCN1P35523 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.71■■□□□ 1.07
CLCN1P35523 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLCN1P35523 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN1P35523 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN1P35523 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
CLCN1P35523 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
CLCN1P35523 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CLCN1P35523 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.7■■□□□ 1.06
CLCN1P35523 AL356652.1-201ENST00000615962 565 ntBASIC21.7■■□□□ 1.06
CLCN1P35523 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN1P35523 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLCN1P35523 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN1P35523 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.69■■□□□ 1.06
CLCN1P35523 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLCN1P35523 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCN1P35523 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCN1P35523 AC073592.3-201ENST00000625118 1834 ntBASIC21.69■■□□□ 1.06
CLCN1P35523 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 AC007322.1-201ENST00000426983 750 ntBASIC21.69■■□□□ 1.06
CLCN1P35523 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.69■■□□□ 1.06
CLCN1P35523 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.69■■□□□ 1.06
CLCN1P35523 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.69■■□□□ 1.06
CLCN1P35523 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.69■■□□□ 1.06
CLCN1P35523 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CLCN1P35523 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCN1P35523 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CLCN1P35523 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN1P35523 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCN1P35523 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLCN1P35523 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 CYP2T1P-201ENST00000432607 1285 ntBASIC21.68■■□□□ 1.06
CLCN1P35523 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 AC009237.14-201ENST00000609975 1594 ntBASIC21.68■■□□□ 1.06
CLCN1P35523 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 FP475955.4-201ENST00000623131 1990 ntBASIC21.68■■□□□ 1.06
CLCN1P35523 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.68■■□□□ 1.06
CLCN1P35523 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CLCN1P35523 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCN1P35523 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 AC080080.1-201ENST00000625121 2420 ntBASIC21.67■■□□□ 1.06
CLCN1P35523 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCN1P35523 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms