Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA11P31270 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA11P31270 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA11P31270 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA11P31270 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 AC073130.3-201ENST00000624389 2278 ntBASIC20.69■□□□□ 0.9
HOXA11P31270 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXA11P31270 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA11P31270 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXA11P31270 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.69■□□□□ 0.9
HOXA11P31270 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXA11P31270 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXA11P31270 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXA11P31270 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXA11P31270 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXA11P31270 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA11P31270 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 GPAT2P1-201ENST00000444924 1672 ntBASIC20.68■□□□□ 0.9
HOXA11P31270 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.68■□□□□ 0.9
HOXA11P31270 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA11P31270 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA11P31270 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA11P31270 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA11P31270 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA11P31270 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA11P31270 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA11P31270 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXA11P31270 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA11P31270 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
HOXA11P31270 CR769767.2-201ENST00000622735 460 ntBASIC20.68■□□□□ 0.9
HOXA11P31270 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXA11P31270 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA11P31270 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA11P31270 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA11P31270 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA11P31270 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 PKD1P6-201ENST00000343738 4769 ntBASIC20.67■□□□□ 0.9
HOXA11P31270 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXA11P31270 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.67■□□□□ 0.9
HOXA11P31270 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA11P31270 AL031133.1-201ENST00000406807 723 ntBASIC20.67■□□□□ 0.9
HOXA11P31270 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 AC009947.2-201ENST00000444014 672 ntBASIC20.67■□□□□ 0.9
HOXA11P31270 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXA11P31270 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA11P31270 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 LINC01238-205ENST00000567549 1107 ntBASIC20.67■□□□□ 0.9
HOXA11P31270 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA11P31270 AC140113.3-201ENST00000605663 199 ntBASIC20.67■□□□□ 0.9
HOXA11P31270 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 KRT8P3-201ENST00000519669 1449 ntBASIC20.67■□□□□ 0.9
HOXA11P31270 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA11P31270 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA11P31270 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HOXA11P31270 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA11P31270 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA11P31270 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA11P31270 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HOXA11P31270 AL023284.2-201ENST00000405850 579 ntBASIC20.66■□□□□ 0.9
HOXA11P31270 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA11P31270 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA11P31270 NEK4P2-201ENST00000580004 1012 ntBASIC20.66■□□□□ 0.9
HOXA11P31270 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms