Protein–RNA interactions for Protein: P30939

HTR1F, 5-hydroxytryptamine receptor 1F, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1FP30939 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1FP30939 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1FP30939 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HTR1FP30939 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1FP30939 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 AC006557.6-201ENST00000623071 864 ntBASIC17.11■□□□□ 0.33
HTR1FP30939 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1FP30939 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1FP30939 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HTR1FP30939 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1FP30939 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HTR1FP30939 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.1■□□□□ 0.33
HTR1FP30939 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HTR1FP30939 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1FP30939 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1FP30939 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HTR1FP30939 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1FP30939 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1FP30939 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1FP30939 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1FP30939 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1FP30939 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.1■□□□□ 0.33
HTR1FP30939 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.1■□□□□ 0.33
HTR1FP30939 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HTR1FP30939 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1FP30939 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 KRT18P16-201ENST00000510337 1294 ntBASIC17.09■□□□□ 0.33
HTR1FP30939 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
HTR1FP30939 AC105036.2-201ENST00000569468 176 ntBASIC17.09■□□□□ 0.33
HTR1FP30939 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.09■□□□□ 0.33
HTR1FP30939 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.09■□□□□ 0.33
HTR1FP30939 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR1FP30939 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTR1FP30939 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 AL133373.2-201ENST00000623187 2828 ntBASIC17.09■□□□□ 0.33
HTR1FP30939 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR1FP30939 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1FP30939 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
HTR1FP30939 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1FP30939 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.08■□□□□ 0.33
HTR1FP30939 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1FP30939 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR1FP30939 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1FP30939 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HTR1FP30939 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1FP30939 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR1FP30939 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HTR1FP30939 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1FP30939 AC004911.1-201ENST00000416316 871 ntBASIC17.08■□□□□ 0.32
HTR1FP30939 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1FP30939 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms