Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.49■□□□□ 0.23
CD40P25942 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.49■□□□□ 0.23
CD40P25942 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CD40P25942 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CD40P25942 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CD40P25942 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.49■□□□□ 0.23
CD40P25942 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD40P25942 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.48■□□□□ 0.23
CD40P25942 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.48■□□□□ 0.23
CD40P25942 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.48■□□□□ 0.23
CD40P25942 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.48■□□□□ 0.23
CD40P25942 AP003041.3-201ENST00000527151 707 ntBASIC16.48■□□□□ 0.23
CD40P25942 AL512604.3-201ENST00000569583 964 ntBASIC16.48■□□□□ 0.23
CD40P25942 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.48■□□□□ 0.23
CD40P25942 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.48■□□□□ 0.23
CD40P25942 AL590326.2-201ENST00000625139 305 ntBASIC16.48■□□□□ 0.23
CD40P25942 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CD40P25942 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
CD40P25942 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD40P25942 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.47■□□□□ 0.23
CD40P25942 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CD40P25942 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CD40P25942 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CD40P25942 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.47■□□□□ 0.23
CD40P25942 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CD40P25942 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.47■□□□□ 0.23
CD40P25942 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.47■□□□□ 0.23
CD40P25942 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.47■□□□□ 0.23
CD40P25942 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.47■□□□□ 0.23
CD40P25942 AC104076.2-201ENST00000448912 469 ntBASIC16.47■□□□□ 0.23
CD40P25942 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.47■□□□□ 0.23
CD40P25942 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CD40P25942 AL138966.2-201ENST00000621997 464 ntBASIC16.47■□□□□ 0.23
CD40P25942 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CD40P25942 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.47■□□□□ 0.23
CD40P25942 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.47■□□□□ 0.23
CD40P25942 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CD40P25942 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CD40P25942 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD40P25942 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.46■□□□□ 0.23
CD40P25942 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 Z82202.1-201ENST00000623446 1880 ntBASIC16.46■□□□□ 0.23
CD40P25942 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CD40P25942 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.46■□□□□ 0.23
CD40P25942 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD40P25942 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD40P25942 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms