Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 NBPF21P-201ENST00000425093 1451 ntBASIC17.86■□□□□ 0.45
CHMP24386 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP24386 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP24386 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP24386 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP24386 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHMP24386 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CHMP24386 AL161938.1-201ENST00000569833 2180 ntBASIC17.85■□□□□ 0.45
CHMP24386 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP24386 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP24386 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP24386 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
CHMP24386 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP24386 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP24386 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP24386 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP24386 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP24386 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP24386 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP24386 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP24386 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP24386 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP24386 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.84■□□□□ 0.45
CHMP24386 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP24386 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.84■□□□□ 0.45
CHMP24386 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP24386 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP24386 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP24386 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP24386 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.83■□□□□ 0.45
CHMP24386 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP24386 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP24386 TFP1-202ENST00000475455 1573 ntBASIC17.83■□□□□ 0.45
CHMP24386 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CHMP24386 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CHMP24386 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
CHMP24386 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.83■□□□□ 0.45
CHMP24386 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP24386 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP24386 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
CHMP24386 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.83■□□□□ 0.45
CHMP24386 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP24386 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP24386 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP24386 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CHMP24386 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP24386 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP24386 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CHMP24386 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP24386 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP24386 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHMP24386 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP24386 KRT16P5-201ENST00000455284 522 ntBASIC17.83■□□□□ 0.44
CHMP24386 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP24386 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP24386 AC004264.1-201ENST00000608354 794 ntBASIC17.83■□□□□ 0.44
CHMP24386 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHMP24386 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CHMP24386 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP24386 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP24386 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP24386 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms