Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.21■□□□□ 0.67
CCND1P24385 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.21■□□□□ 0.67
CCND1P24385 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCND1P24385 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCND1P24385 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCND1P24385 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 AC009237.14-201ENST00000609975 1594 ntBASIC19.2■□□□□ 0.66
CCND1P24385 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCND1P24385 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.2■□□□□ 0.66
CCND1P24385 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCND1P24385 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.2■□□□□ 0.66
CCND1P24385 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.2■□□□□ 0.66
CCND1P24385 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.2■□□□□ 0.66
CCND1P24385 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.2■□□□□ 0.66
CCND1P24385 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
CCND1P24385 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCND1P24385 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 AC090164.3-201ENST00000610780 2143 ntBASIC19.19■□□□□ 0.66
CCND1P24385 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.19■□□□□ 0.66
CCND1P24385 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.19■□□□□ 0.66
CCND1P24385 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.19■□□□□ 0.66
CCND1P24385 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.19■□□□□ 0.66
CCND1P24385 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.19■□□□□ 0.66
CCND1P24385 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.19■□□□□ 0.66
CCND1P24385 AC006557.6-201ENST00000623071 864 ntBASIC19.19■□□□□ 0.66
CCND1P24385 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CCND1P24385 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.19■□□□□ 0.66
CCND1P24385 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.19■□□□□ 0.66
CCND1P24385 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCND1P24385 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
CCND1P24385 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CCND1P24385 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.18■□□□□ 0.66
CCND1P24385 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 SOX15-203ENST00000570788 1093 ntBASIC19.18■□□□□ 0.66
CCND1P24385 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCND1P24385 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.18■□□□□ 0.66
CCND1P24385 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCND1P24385 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCND1P24385 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCND1P24385 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCND1P24385 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCND1P24385 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.17■□□□□ 0.66
CCND1P24385 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCND1P24385 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms