Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.47■□□□□ 0.23
CCL1P22362 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCL1P22362 ANO7L1-203ENST00000602586 1720 ntBASIC16.47■□□□□ 0.23
CCL1P22362 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 AC079598.2-202ENST00000546624 1451 ntBASIC16.47■□□□□ 0.23
CCL1P22362 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCL1P22362 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.47■□□□□ 0.23
CCL1P22362 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.46■□□□□ 0.23
CCL1P22362 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCL1P22362 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL1P22362 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CCL1P22362 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCL1P22362 HLA-L-209ENST00000420110 1011 ntBASIC16.46■□□□□ 0.23
CCL1P22362 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.46■□□□□ 0.23
CCL1P22362 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
CCL1P22362 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.46■□□□□ 0.23
CCL1P22362 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.46■□□□□ 0.23
CCL1P22362 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL1P22362 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.46■□□□□ 0.23
CCL1P22362 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCL1P22362 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCL1P22362 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCL1P22362 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.46■□□□□ 0.22
CCL1P22362 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCL1P22362 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CCL1P22362 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 AC120498.9-201ENST00000339021 3867 ntBASIC16.45■□□□□ 0.22
CCL1P22362 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.45■□□□□ 0.22
CCL1P22362 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.45■□□□□ 0.22
CCL1P22362 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.45■□□□□ 0.22
CCL1P22362 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.45■□□□□ 0.22
CCL1P22362 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CCL1P22362 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCL1P22362 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.45■□□□□ 0.22
CCL1P22362 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCL1P22362 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
CCL1P22362 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCL1P22362 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL1P22362 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL1P22362 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
CCL1P22362 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL1P22362 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.44■□□□□ 0.22
CCL1P22362 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.44■□□□□ 0.22
CCL1P22362 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL1P22362 KRT16P5-201ENST00000455284 522 ntBASIC16.44■□□□□ 0.22
CCL1P22362 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL1P22362 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 Z85996.1-201ENST00000494644 937 ntBASIC16.44■□□□□ 0.22
CCL1P22362 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.44■□□□□ 0.22
CCL1P22362 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.44■□□□□ 0.22
CCL1P22362 AC233263.1-201ENST00000578059 224 ntBASIC16.44■□□□□ 0.22
CCL1P22362 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.44■□□□□ 0.22
CCL1P22362 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCL1P22362 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms