Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
XRCC1P18887 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.06■□□□□ 0.64
XRCC1P18887 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.06■□□□□ 0.64
XRCC1P18887 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
XRCC1P18887 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
XRCC1P18887 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
XRCC1P18887 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.05■□□□□ 0.64
XRCC1P18887 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.05■□□□□ 0.64
XRCC1P18887 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.05■□□□□ 0.64
XRCC1P18887 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.05■□□□□ 0.64
XRCC1P18887 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.05■□□□□ 0.64
XRCC1P18887 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.05■□□□□ 0.64
XRCC1P18887 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.05■□□□□ 0.64
XRCC1P18887 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.05■□□□□ 0.64
XRCC1P18887 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.05■□□□□ 0.64
XRCC1P18887 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.05■□□□□ 0.64
XRCC1P18887 AC073912.3-201ENST00000624414 853 ntBASIC19.05■□□□□ 0.64
XRCC1P18887 CR392000.1-201ENST00000624770 1228 ntBASIC19.05■□□□□ 0.64
XRCC1P18887 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 KRT16P1-201ENST00000399124 1418 ntBASIC19.05■□□□□ 0.64
XRCC1P18887 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
XRCC1P18887 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.05■□□□□ 0.64
XRCC1P18887 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.05■□□□□ 0.64
XRCC1P18887 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC1P18887 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC1P18887 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.04■□□□□ 0.64
XRCC1P18887 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.04■□□□□ 0.64
XRCC1P18887 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC1P18887 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
XRCC1P18887 NUDT16P1-203ENST00000513809 620 ntBASIC19.04■□□□□ 0.64
XRCC1P18887 AL355075.4-201ENST00000554988 638 ntBASIC19.04■□□□□ 0.64
XRCC1P18887 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.04■□□□□ 0.64
XRCC1P18887 AL445675.2-201ENST00000620291 557 ntBASIC19.04■□□□□ 0.64
XRCC1P18887 REXO1L12P-201ENST00000622156 912 ntBASIC19.04■□□□□ 0.64
XRCC1P18887 AC007613.1-201ENST00000572811 2597 ntBASIC19.04■□□□□ 0.64
XRCC1P18887 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
XRCC1P18887 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
XRCC1P18887 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
XRCC1P18887 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC1P18887 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
XRCC1P18887 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
XRCC1P18887 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC1P18887 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 AC005082.1-201ENST00000413042 2259 ntBASIC19.03■□□□□ 0.64
XRCC1P18887 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC1P18887 AC009237.14-201ENST00000609975 1594 ntBASIC19.03■□□□□ 0.64
XRCC1P18887 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.03■□□□□ 0.64
XRCC1P18887 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 BX088651.1-201ENST00000540551 451 ntBASIC19.03■□□□□ 0.64
XRCC1P18887 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.03■□□□□ 0.64
XRCC1P18887 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.03■□□□□ 0.64
XRCC1P18887 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
XRCC1P18887 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.03■□□□□ 0.64
XRCC1P18887 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
XRCC1P18887 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
XRCC1P18887 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
XRCC1P18887 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.02■□□□□ 0.64
XRCC1P18887 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
XRCC1P18887 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
XRCC1P18887 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.02■□□□□ 0.64
XRCC1P18887 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
XRCC1P18887 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
XRCC1P18887 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms