Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRKCAP17252 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.67■□□□□ 0.42
PRKCAP17252 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.67■□□□□ 0.42
PRKCAP17252 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.67■□□□□ 0.42
PRKCAP17252 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRKCAP17252 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRKCAP17252 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRKCAP17252 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRKCAP17252 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
PRKCAP17252 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRKCAP17252 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRKCAP17252 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRKCAP17252 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRKCAP17252 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PRKCAP17252 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.66■□□□□ 0.42
PRKCAP17252 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PRKCAP17252 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PRKCAP17252 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PRKCAP17252 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PRKCAP17252 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.66■□□□□ 0.42
PRKCAP17252 C1QL1P1-201ENST00000568105 661 ntBASIC17.66■□□□□ 0.42
PRKCAP17252 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.66■□□□□ 0.42
PRKCAP17252 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.66■□□□□ 0.42
PRKCAP17252 FAM197Y4-202ENST00000622692 608 ntBASIC17.66■□□□□ 0.42
PRKCAP17252 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PRKCAP17252 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.66■□□□□ 0.42
PRKCAP17252 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
PRKCAP17252 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRKCAP17252 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PRKCAP17252 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRKCAP17252 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.65■□□□□ 0.42
PRKCAP17252 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PRKCAP17252 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.65■□□□□ 0.42
PRKCAP17252 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.65■□□□□ 0.42
PRKCAP17252 GCSHP5-201ENST00000443090 522 ntBASIC17.65■□□□□ 0.42
PRKCAP17252 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.65■□□□□ 0.42
PRKCAP17252 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 AC142381.4-202ENST00000563973 229 ntBASIC17.65■□□□□ 0.42
PRKCAP17252 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.65■□□□□ 0.42
PRKCAP17252 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.65■□□□□ 0.42
PRKCAP17252 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.65■□□□□ 0.42
PRKCAP17252 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRKCAP17252 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.65■□□□□ 0.42
PRKCAP17252 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRKCAP17252 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRKCAP17252 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.64■□□□□ 0.42
PRKCAP17252 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRKCAP17252 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
PRKCAP17252 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRKCAP17252 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.64■□□□□ 0.41
PRKCAP17252 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms