Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.97■□□□□ 0.31
CTLA4P16410 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.97■□□□□ 0.31
CTLA4P16410 KRT16P5-201ENST00000455284 522 ntBASIC16.97■□□□□ 0.31
CTLA4P16410 AC006058.3-201ENST00000606217 1069 ntBASIC16.97■□□□□ 0.31
CTLA4P16410 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.97■□□□□ 0.31
CTLA4P16410 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTLA4P16410 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CTLA4P16410 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
CTLA4P16410 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTLA4P16410 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTLA4P16410 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTLA4P16410 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CTLA4P16410 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTLA4P16410 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.96■□□□□ 0.31
CTLA4P16410 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.96■□□□□ 0.31
CTLA4P16410 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.96■□□□□ 0.31
CTLA4P16410 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTLA4P16410 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.96■□□□□ 0.31
CTLA4P16410 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.96■□□□□ 0.31
CTLA4P16410 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.96■□□□□ 0.31
CTLA4P16410 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTLA4P16410 RN7SL471P-201ENST00000580476 299 ntBASIC16.96■□□□□ 0.31
CTLA4P16410 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.96■□□□□ 0.31
CTLA4P16410 MIR4651-201ENST00000582622 73 ntBASIC16.96■□□□□ 0.31
CTLA4P16410 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.96■□□□□ 0.31
CTLA4P16410 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.96■□□□□ 0.31
CTLA4P16410 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
CTLA4P16410 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTLA4P16410 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CTLA4P16410 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTLA4P16410 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTLA4P16410 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTLA4P16410 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CTLA4P16410 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.96■□□□□ 0.3
CTLA4P16410 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTLA4P16410 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTLA4P16410 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CTLA4P16410 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CTLA4P16410 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
CTLA4P16410 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.95■□□□□ 0.3
CTLA4P16410 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.95■□□□□ 0.3
CTLA4P16410 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.95■□□□□ 0.3
CTLA4P16410 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 TSPY21P-201ENST00000433481 731 ntBASIC16.95■□□□□ 0.3
CTLA4P16410 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.95■□□□□ 0.3
CTLA4P16410 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 AC133681.1-201ENST00000465482 601 ntBASIC16.95■□□□□ 0.3
CTLA4P16410 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.95■□□□□ 0.3
CTLA4P16410 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 CD99P1-205ENST00000527459 561 ntBASIC16.95■□□□□ 0.3
CTLA4P16410 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.95■□□□□ 0.3
CTLA4P16410 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.95■□□□□ 0.3
CTLA4P16410 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTLA4P16410 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.95■□□□□ 0.3
CTLA4P16410 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.95■□□□□ 0.3
CTLA4P16410 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.95■□□□□ 0.3
CTLA4P16410 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CTLA4P16410 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTLA4P16410 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CTLA4P16410 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTLA4P16410 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.94■□□□□ 0.3
CTLA4P16410 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTLA4P16410 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CTLA4P16410 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTLA4P16410 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTLA4P16410 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.94■□□□□ 0.3
CTLA4P16410 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.94■□□□□ 0.3
CTLA4P16410 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.94■□□□□ 0.3
CTLA4P16410 TSPY23P-201ENST00000440136 739 ntBASIC16.94■□□□□ 0.3
CTLA4P16410 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTLA4P16410 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.94■□□□□ 0.3
CTLA4P16410 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.94■□□□□ 0.3
CTLA4P16410 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTLA4P16410 AC110285.5-201ENST00000611501 352 ntBASIC16.94■□□□□ 0.3
CTLA4P16410 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTLA4P16410 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CTLA4P16410 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms