Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 YBX1P2-201ENST00000489612 999 ntBASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RAB40ALP0C0E4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 TSPY5P-201ENST00000426936 936 ntBASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40ALP0C0E4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 KRT8P11-201ENST00000409686 1436 ntBASIC18■□□□□ 0.47
RAB40ALP0C0E4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 AP003041.3-201ENST00000527151 707 ntBASIC18■□□□□ 0.47
RAB40ALP0C0E4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18■□□□□ 0.47
RAB40ALP0C0E4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40ALP0C0E4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms