Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
FREM3P0C091 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
FREM3P0C091 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM3P0C091 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM3P0C091 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.36■□□□□ 0.37
FREM3P0C091 AL032819.2-201ENST00000624543 2162 ntBASIC17.36■□□□□ 0.37
FREM3P0C091 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM3P0C091 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.35■□□□□ 0.37
FREM3P0C091 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM3P0C091 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 AL445228.2-201ENST00000605589 952 ntBASIC17.35■□□□□ 0.37
FREM3P0C091 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.35■□□□□ 0.37
FREM3P0C091 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FREM3P0C091 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FREM3P0C091 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM3P0C091 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.35■□□□□ 0.37
FREM3P0C091 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.35■□□□□ 0.37
FREM3P0C091 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FREM3P0C091 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FREM3P0C091 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FREM3P0C091 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
FREM3P0C091 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.34■□□□□ 0.37
FREM3P0C091 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 TMPOP1-202ENST00000424642 1267 ntBASIC17.34■□□□□ 0.37
FREM3P0C091 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.34■□□□□ 0.37
FREM3P0C091 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
FREM3P0C091 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.34■□□□□ 0.37
FREM3P0C091 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.34■□□□□ 0.37
FREM3P0C091 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.34■□□□□ 0.37
FREM3P0C091 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 SDHAP1-207ENST00000440850 2000 ntBASIC17.34■□□□□ 0.37
FREM3P0C091 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
FREM3P0C091 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FREM3P0C091 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
FREM3P0C091 KRT8P11-201ENST00000409686 1436 ntBASIC17.33■□□□□ 0.37
FREM3P0C091 INGX-201ENST00000359239 846 ntBASIC17.33■□□□□ 0.37
FREM3P0C091 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.33■□□□□ 0.37
FREM3P0C091 AC008040.2-201ENST00000461049 708 ntBASIC17.33■□□□□ 0.37
FREM3P0C091 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM3P0C091 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM3P0C091 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FREM3P0C091 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
FREM3P0C091 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.33■□□□□ 0.37
FREM3P0C091 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 AC073508.3-201ENST00000619697 1419 ntBASIC17.33■□□□□ 0.36
FREM3P0C091 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.33■□□□□ 0.36
FREM3P0C091 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.33■□□□□ 0.36
FREM3P0C091 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FREM3P0C091 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.33■□□□□ 0.36
FREM3P0C091 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.33■□□□□ 0.36
FREM3P0C091 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
FREM3P0C091 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.33■□□□□ 0.36
FREM3P0C091 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.33■□□□□ 0.36
FREM3P0C091 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FREM3P0C091 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FREM3P0C091 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FREM3P0C091 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FREM3P0C091 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.32■□□□□ 0.36
FREM3P0C091 MIR1224-201ENST00000408193 85 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms