Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 AP006294.2-201ENST00000641667 209 ntBASIC19.41■□□□□ 0.7
HLA-DQB2P05538 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 TSPY7P-201ENST00000431358 1114 ntBASIC19.4■□□□□ 0.7
HLA-DQB2P05538 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 AC130371.2-201ENST00000619443 611 ntBASIC19.4■□□□□ 0.7
HLA-DQB2P05538 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DQB2P05538 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DQB2P05538 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DQB2P05538 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DQB2P05538 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DQB2P05538 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 AC116562.2-201ENST00000507042 360 ntBASIC19.39■□□□□ 0.69
HLA-DQB2P05538 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 AC026471.5-201ENST00000615068 467 ntBASIC19.39■□□□□ 0.69
HLA-DQB2P05538 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 FSCN1P1-201ENST00000568912 1481 ntBASIC19.39■□□□□ 0.69
HLA-DQB2P05538 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DQB2P05538 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 FAM207BP-201ENST00000447172 505 ntBASIC19.38■□□□□ 0.69
HLA-DQB2P05538 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 REXO1L10P-201ENST00000615707 1290 ntBASIC19.38■□□□□ 0.69
HLA-DQB2P05538 REXO1L12P-201ENST00000622156 912 ntBASIC19.38■□□□□ 0.69
HLA-DQB2P05538 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DQB2P05538 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms