Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.14■□□□□ 0.01
IFNA1P01562 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
IFNA1P01562 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.14■□□□□ 0.01
IFNA1P01562 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.14■□□□□ 0.01
IFNA1P01562 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.13■□□□□ 0.01
IFNA1P01562 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 IRX1P1-201ENST00000438849 1838 ntBASIC15.13■□□□□ 0.01
IFNA1P01562 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 KRT8P20-201ENST00000423953 1409 ntBASIC15.13■□□□□ 0.01
IFNA1P01562 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.13■□□□□ 0.01
IFNA1P01562 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.13■□□□□ 0.01
IFNA1P01562 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IFNA1P01562 AC233992.3-201ENST00000607491 485 ntBASIC15.13■□□□□ 0.01
IFNA1P01562 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.13■□□□□ 0.01
IFNA1P01562 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.13■□□□□ 0.01
IFNA1P01562 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IFNA1P01562 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IFNA1P01562 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IFNA1P01562 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.13■□□□□ 0.01
IFNA1P01562 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IFNA1P01562 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
IFNA1P01562 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
IFNA1P01562 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.12■□□□□ 0.01
IFNA1P01562 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.12■□□□□ 0.01
IFNA1P01562 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.12■□□□□ 0.01
IFNA1P01562 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.12■□□□□ 0.01
IFNA1P01562 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.12■□□□□ 0.01
IFNA1P01562 PHGDH-210ENST00000641115 1638 ntBASIC15.12■□□□□ 0.01
IFNA1P01562 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
IFNA1P01562 AC067852.2-201ENST00000590513 2313 ntBASIC15.12■□□□□ 0.01
IFNA1P01562 KRT87P-202ENST00000534226 1464 ntBASIC15.12■□□□□ 0.01
IFNA1P01562 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.12■□□□□ 0.01
IFNA1P01562 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IFNA1P01562 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
IFNA1P01562 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
IFNA1P01562 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
IFNA1P01562 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.11■□□□□ 0.01
IFNA1P01562 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 SIRPAP1-201ENST00000448467 1770 ntBASIC15.11■□□□□ 0.01
IFNA1P01562 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
IFNA1P01562 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms