Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX30O94993 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SOX30O94993 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 AP002982.1-201ENST00000492365 877 ntBASIC17.79■□□□□ 0.44
SOX30O94993 RPPH1-201ENST00000516869 333 ntBASIC17.79■□□□□ 0.44
SOX30O94993 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX30O94993 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.79■□□□□ 0.44
SOX30O94993 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.79■□□□□ 0.44
SOX30O94993 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX30O94993 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SOX30O94993 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX30O94993 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX30O94993 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SOX30O94993 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX30O94993 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX30O94993 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SOX30O94993 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.78■□□□□ 0.44
SOX30O94993 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SOX30O94993 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX30O94993 AC098590.1-201ENST00000468126 897 ntBASIC17.78■□□□□ 0.44
SOX30O94993 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SOX30O94993 C1QBPP2-201ENST00000528754 825 ntBASIC17.78■□□□□ 0.44
SOX30O94993 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SOX30O94993 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX30O94993 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SOX30O94993 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX30O94993 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SOX30O94993 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SOX30O94993 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX30O94993 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX30O94993 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX30O94993 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SOX30O94993 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SOX30O94993 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SOX30O94993 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX30O94993 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.77■□□□□ 0.44
SOX30O94993 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SOX30O94993 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SOX30O94993 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.77■□□□□ 0.44
SOX30O94993 AC026271.3-201ENST00000571884 352 ntBASIC17.77■□□□□ 0.44
SOX30O94993 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SOX30O94993 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX30O94993 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SOX30O94993 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX30O94993 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
SOX30O94993 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.77■□□□□ 0.43
SOX30O94993 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX30O94993 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 HTR7P1-201ENST00000538670 1336 ntBASIC17.76■□□□□ 0.43
SOX30O94993 AC004408.2-201ENST00000623613 2777 ntBASIC17.76■□□□□ 0.43
SOX30O94993 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX30O94993 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
SOX30O94993 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX30O94993 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms