Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.28■□□□□ 0.52
SNRNP200O75643 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.28■□□□□ 0.52
SNRNP200O75643 AP003041.3-201ENST00000527151 707 ntBASIC18.28■□□□□ 0.52
SNRNP200O75643 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SNRNP200O75643 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP200O75643 CKBP1-201ENST00000565489 1086 ntBASIC18.28■□□□□ 0.52
SNRNP200O75643 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP200O75643 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP200O75643 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 KRT18P22-201ENST00000402024 1347 ntBASIC18.28■□□□□ 0.52
SNRNP200O75643 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNRNP200O75643 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNRNP200O75643 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.28■□□□□ 0.52
SNRNP200O75643 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP200O75643 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.27■□□□□ 0.52
SNRNP200O75643 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP200O75643 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP200O75643 AC141586.3-201ENST00000562166 1838 ntBASIC18.27■□□□□ 0.52
SNRNP200O75643 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP200O75643 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.27■□□□□ 0.52
SNRNP200O75643 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SNRNP200O75643 TSPY21P-201ENST00000433481 731 ntBASIC18.27■□□□□ 0.52
SNRNP200O75643 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.27■□□□□ 0.52
SNRNP200O75643 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP200O75643 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SNRNP200O75643 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SNRNP200O75643 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNRNP200O75643 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.27■□□□□ 0.51
SNRNP200O75643 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.27■□□□□ 0.51
SNRNP200O75643 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNRNP200O75643 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.26■□□□□ 0.51
SNRNP200O75643 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 AC005521.1-201ENST00000393351 872 ntBASIC18.26■□□□□ 0.51
SNRNP200O75643 TSPY17P-201ENST00000450329 467 ntBASIC18.26■□□□□ 0.51
SNRNP200O75643 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 AC008622.2-201ENST00000617006 1229 ntBASIC18.26■□□□□ 0.51
SNRNP200O75643 AC130371.2-201ENST00000619443 611 ntBASIC18.26■□□□□ 0.51
SNRNP200O75643 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.26■□□□□ 0.51
SNRNP200O75643 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.26■□□□□ 0.51
SNRNP200O75643 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNRNP200O75643 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.26■□□□□ 0.51
SNRNP200O75643 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.26■□□□□ 0.51
SNRNP200O75643 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.26■□□□□ 0.51
SNRNP200O75643 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNRNP200O75643 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.25■□□□□ 0.51
SNRNP200O75643 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 HMGA1P5-201ENST00000412453 271 ntBASIC18.25■□□□□ 0.51
SNRNP200O75643 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.25■□□□□ 0.51
SNRNP200O75643 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 AL023803.3-201ENST00000615559 522 ntBASIC18.25■□□□□ 0.51
SNRNP200O75643 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.25■□□□□ 0.51
SNRNP200O75643 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 AL161938.1-201ENST00000569833 2180 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms