Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.46■■□□□ 1.03
ACTN4O43707 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ACTN4O43707 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.46■■□□□ 1.03
ACTN4O43707 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ACTN4O43707 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.46■■□□□ 1.03
ACTN4O43707 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.46■■□□□ 1.03
ACTN4O43707 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.46■■□□□ 1.03
ACTN4O43707 NEFHP1-201ENST00000412845 2629 ntBASIC21.46■■□□□ 1.03
ACTN4O43707 AL512353.2-201ENST00000448759 1962 ntBASIC21.46■■□□□ 1.03
ACTN4O43707 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.46■■□□□ 1.03
ACTN4O43707 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ACTN4O43707 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACTN4O43707 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACTN4O43707 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ACTN4O43707 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ACTN4O43707 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ACTN4O43707 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.45■■□□□ 1.03
ACTN4O43707 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
ACTN4O43707 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.45■■□□□ 1.02
ACTN4O43707 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.45■■□□□ 1.02
ACTN4O43707 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.45■■□□□ 1.02
ACTN4O43707 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.45■■□□□ 1.02
ACTN4O43707 TSPY21P-201ENST00000433481 731 ntBASIC21.45■■□□□ 1.02
ACTN4O43707 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.45■■□□□ 1.02
ACTN4O43707 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.45■■□□□ 1.02
ACTN4O43707 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
ACTN4O43707 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ACTN4O43707 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.45■■□□□ 1.02
ACTN4O43707 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.45■■□□□ 1.02
ACTN4O43707 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.45■■□□□ 1.02
ACTN4O43707 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
ACTN4O43707 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ACTN4O43707 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.44■■□□□ 1.02
ACTN4O43707 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.44■■□□□ 1.02
ACTN4O43707 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.44■■□□□ 1.02
ACTN4O43707 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
ACTN4O43707 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.44■■□□□ 1.02
ACTN4O43707 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.44■■□□□ 1.02
ACTN4O43707 AC124016.1-201ENST00000609552 612 ntBASIC21.44■■□□□ 1.02
ACTN4O43707 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ACTN4O43707 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
ACTN4O43707 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ACTN4O43707 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ACTN4O43707 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.43■■□□□ 1.02
ACTN4O43707 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.43■■□□□ 1.02
ACTN4O43707 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.43■■□□□ 1.02
ACTN4O43707 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 AC239809.2-201ENST00000415381 517 ntBASIC21.43■■□□□ 1.02
ACTN4O43707 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.43■■□□□ 1.02
ACTN4O43707 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.43■■□□□ 1.02
ACTN4O43707 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
ACTN4O43707 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.43■■□□□ 1.02
ACTN4O43707 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
ACTN4O43707 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.43■■□□□ 1.02
ACTN4O43707 Z98044.1-201ENST00000632503 1764 ntBASIC21.43■■□□□ 1.02
ACTN4O43707 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ACTN4O43707 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.43■■□□□ 1.02
ACTN4O43707 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.43■■□□□ 1.02
ACTN4O43707 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.42■■□□□ 1.02
ACTN4O43707 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ACTN4O43707 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ACTN4O43707 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ACTN4O43707 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ACTN4O43707 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.42■■□□□ 1.02
ACTN4O43707 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ACTN4O43707 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
ACTN4O43707 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.42■■□□□ 1.02
ACTN4O43707 KRT16P5-201ENST00000455284 522 ntBASIC21.42■■□□□ 1.02
ACTN4O43707 Z85996.1-201ENST00000494644 937 ntBASIC21.42■■□□□ 1.02
ACTN4O43707 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.42■■□□□ 1.02
ACTN4O43707 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms