Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.13■□□□□ 0.65
LDB2O43679 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LDB2O43679 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.12■□□□□ 0.65
LDB2O43679 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 AIRN-201ENST00000601203 4374 ntBASIC19.12■□□□□ 0.65
LDB2O43679 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.12■□□□□ 0.65
LDB2O43679 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.12■□□□□ 0.65
LDB2O43679 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 AC004951.3-201ENST00000418645 1148 ntBASIC19.12■□□□□ 0.65
LDB2O43679 AC012618.2-201ENST00000428058 849 ntBASIC19.12■□□□□ 0.65
LDB2O43679 AC011506.1-201ENST00000474329 610 ntBASIC19.12■□□□□ 0.65
LDB2O43679 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 CD177P1-201ENST00000606252 935 ntBASIC19.12■□□□□ 0.65
LDB2O43679 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.12■□□□□ 0.65
LDB2O43679 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.12■□□□□ 0.65
LDB2O43679 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDB2O43679 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
LDB2O43679 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LDB2O43679 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.11■□□□□ 0.65
LDB2O43679 MESTP1-201ENST00000404287 994 ntBASIC19.11■□□□□ 0.65
LDB2O43679 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LDB2O43679 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.11■□□□□ 0.65
LDB2O43679 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LDB2O43679 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LDB2O43679 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.11■□□□□ 0.65
LDB2O43679 AC130371.2-201ENST00000619443 611 ntBASIC19.11■□□□□ 0.65
LDB2O43679 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.11■□□□□ 0.65
LDB2O43679 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDB2O43679 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
LDB2O43679 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LDB2O43679 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.1■□□□□ 0.65
LDB2O43679 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LDB2O43679 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB2O43679 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LDB2O43679 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB2O43679 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 B3GAT3P1-201ENST00000471720 806 ntBASIC19.1■□□□□ 0.65
LDB2O43679 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.1■□□□□ 0.65
LDB2O43679 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.1■□□□□ 0.65
LDB2O43679 Z99916.2-201ENST00000604037 246 ntBASIC19.1■□□□□ 0.65
LDB2O43679 AC011298.2-201ENST00000617989 482 ntBASIC19.1■□□□□ 0.65
LDB2O43679 AC113410.3-201ENST00000623366 203 ntBASIC19.1■□□□□ 0.65
LDB2O43679 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB2O43679 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDB2O43679 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB2O43679 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.1■□□□□ 0.65
LDB2O43679 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LDB2O43679 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.09■□□□□ 0.65
LDB2O43679 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LDB2O43679 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 AC093503.3-201ENST00000624917 2352 ntBASIC19.09■□□□□ 0.65
LDB2O43679 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDB2O43679 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LDB2O43679 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms