Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
SMAD6O43541 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
SMAD6O43541 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD6O43541 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD6O43541 AL032819.2-201ENST00000624543 2162 ntBASIC19.33■□□□□ 0.69
SMAD6O43541 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.33■□□□□ 0.69
SMAD6O43541 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD6O43541 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SMAD6O43541 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.33■□□□□ 0.68
SMAD6O43541 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.33■□□□□ 0.68
SMAD6O43541 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.33■□□□□ 0.68
SMAD6O43541 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMAD6O43541 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.33■□□□□ 0.68
SMAD6O43541 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SMAD6O43541 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD6O43541 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD6O43541 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD6O43541 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD6O43541 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SMAD6O43541 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD6O43541 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.33■□□□□ 0.68
SMAD6O43541 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.33■□□□□ 0.68
SMAD6O43541 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.32■□□□□ 0.68
SMAD6O43541 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMAD6O43541 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SMAD6O43541 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 AL137013.1-201ENST00000432946 1228 ntBASIC19.32■□□□□ 0.68
SMAD6O43541 TSPY17P-201ENST00000450329 467 ntBASIC19.32■□□□□ 0.68
SMAD6O43541 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.32■□□□□ 0.68
SMAD6O43541 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SMAD6O43541 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD6O43541 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SMAD6O43541 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.31■□□□□ 0.68
SMAD6O43541 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.31■□□□□ 0.68
SMAD6O43541 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.31■□□□□ 0.68
SMAD6O43541 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.31■□□□□ 0.68
SMAD6O43541 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.31■□□□□ 0.68
SMAD6O43541 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.31■□□□□ 0.68
SMAD6O43541 AP003041.3-201ENST00000527151 707 ntBASIC19.31■□□□□ 0.68
SMAD6O43541 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.31■□□□□ 0.68
SMAD6O43541 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMAD6O43541 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.31■□□□□ 0.68
SMAD6O43541 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD6O43541 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
SMAD6O43541 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.3■□□□□ 0.68
SMAD6O43541 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMAD6O43541 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
SMAD6O43541 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.3■□□□□ 0.68
SMAD6O43541 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.3■□□□□ 0.68
SMAD6O43541 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SMAD6O43541 TMPOP1-202ENST00000424642 1267 ntBASIC19.3■□□□□ 0.68
SMAD6O43541 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.3■□□□□ 0.68
SMAD6O43541 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.3■□□□□ 0.68
SMAD6O43541 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.3■□□□□ 0.68
SMAD6O43541 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.3■□□□□ 0.68
SMAD6O43541 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.3■□□□□ 0.68
SMAD6O43541 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.3■□□□□ 0.68
SMAD6O43541 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 AC010653.2-201ENST00000623505 997 ntBASIC19.3■□□□□ 0.68
SMAD6O43541 AC092865.7-201ENST00000641832 219 ntBASIC19.3■□□□□ 0.68
SMAD6O43541 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMAD6O43541 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SMAD6O43541 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.3■□□□□ 0.68
SMAD6O43541 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD6O43541 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD6O43541 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD6O43541 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms