Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN6O15212 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.15■□□□□ 0.66
PFDN6O15212 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN6O15212 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.15■□□□□ 0.66
PFDN6O15212 POU5F1P3-201ENST00000428824 1078 ntBASIC19.15■□□□□ 0.66
PFDN6O15212 FAM201B-201ENST00000458407 597 ntBASIC19.15■□□□□ 0.66
PFDN6O15212 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN6O15212 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.15■□□□□ 0.66
PFDN6O15212 AL160286.2-201ENST00000567150 934 ntBASIC19.15■□□□□ 0.66
PFDN6O15212 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN6O15212 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.15■□□□□ 0.66
PFDN6O15212 AC073648.6-201ENST00000641589 218 ntBASIC19.15■□□□□ 0.66
PFDN6O15212 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN6O15212 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PFDN6O15212 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN6O15212 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN6O15212 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN6O15212 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN6O15212 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PFDN6O15212 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.15■□□□□ 0.66
PFDN6O15212 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PFDN6O15212 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PFDN6O15212 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
PFDN6O15212 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PFDN6O15212 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.14■□□□□ 0.65
PFDN6O15212 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 AC233263.1-201ENST00000578059 224 ntBASIC19.14■□□□□ 0.65
PFDN6O15212 AC124016.1-201ENST00000609552 612 ntBASIC19.14■□□□□ 0.65
PFDN6O15212 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
PFDN6O15212 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
PFDN6O15212 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
PFDN6O15212 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN6O15212 AC087289.5-201ENST00000586076 3175 ntBASIC19.14■□□□□ 0.65
PFDN6O15212 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.13■□□□□ 0.65
PFDN6O15212 SDHAP1-207ENST00000440850 2000 ntBASIC19.13■□□□□ 0.65
PFDN6O15212 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PFDN6O15212 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PFDN6O15212 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 AC128676.1-201ENST00000454392 318 ntBASIC19.13■□□□□ 0.65
PFDN6O15212 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.13■□□□□ 0.65
PFDN6O15212 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PFDN6O15212 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.13■□□□□ 0.65
PFDN6O15212 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.13■□□□□ 0.65
PFDN6O15212 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 TEX21P-204ENST00000641479 1693 ntBASIC19.13■□□□□ 0.65
PFDN6O15212 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.13■□□□□ 0.65
PFDN6O15212 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN6O15212 HTR7P1-202ENST00000624664 4411 ntBASIC19.13■□□□□ 0.65
PFDN6O15212 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.12■□□□□ 0.65
PFDN6O15212 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.12■□□□□ 0.65
PFDN6O15212 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PFDN6O15212 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.12■□□□□ 0.65
PFDN6O15212 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PFDN6O15212 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.12■□□□□ 0.65
PFDN6O15212 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PFDN6O15212 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PFDN6O15212 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PFDN6O15212 AC026471.1-201ENST00000564629 3026 ntBASIC19.12■□□□□ 0.65
PFDN6O15212 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.12■□□□□ 0.65
PFDN6O15212 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN6O15212 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PFDN6O15212 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN6O15212 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PFDN6O15212 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN6O15212 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN6O15212 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms