Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
FOXN3O00409 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN3O00409 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXN3O00409 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
FOXN3O00409 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXN3O00409 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 PRORSD1P-201ENST00000295112 541 ntBASIC20.46■□□□□ 0.87
FOXN3O00409 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 KRT18P29-201ENST00000397031 1267 ntBASIC20.46■□□□□ 0.87
FOXN3O00409 AC004980.1-204ENST00000429707 299 ntBASIC20.46■□□□□ 0.87
FOXN3O00409 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.46■□□□□ 0.87
FOXN3O00409 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXN3O00409 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXN3O00409 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXN3O00409 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXN3O00409 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN3O00409 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.45■□□□□ 0.87
FOXN3O00409 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
FOXN3O00409 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXN3O00409 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
FOXN3O00409 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXN3O00409 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 AP002982.1-201ENST00000492365 877 ntBASIC20.45■□□□□ 0.86
FOXN3O00409 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXN3O00409 AC131212.4-201ENST00000623606 975 ntBASIC20.45■□□□□ 0.86
FOXN3O00409 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXN3O00409 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXN3O00409 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXN3O00409 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN3O00409 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
FOXN3O00409 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN3O00409 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.44■□□□□ 0.86
FOXN3O00409 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.44■□□□□ 0.86
FOXN3O00409 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN3O00409 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXN3O00409 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
FOXN3O00409 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN3O00409 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
FOXN3O00409 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.44■□□□□ 0.86
FOXN3O00409 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN3O00409 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXN3O00409 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXN3O00409 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXN3O00409 AL138781.2-201ENST00000617896 1843 ntBASIC20.43■□□□□ 0.86
FOXN3O00409 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN3O00409 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN3O00409 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN3O00409 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 KSR1P1-201ENST00000446298 240 ntBASIC20.43■□□□□ 0.86
FOXN3O00409 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXN3O00409 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.43■□□□□ 0.86
FOXN3O00409 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms