Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SLC28A1O00337 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A1O00337 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC28A1O00337 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC28A1O00337 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A1O00337 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC28A1O00337 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A1O00337 UNC93B5-201ENST00000530315 699 ntBASIC18.41■□□□□ 0.54
SLC28A1O00337 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A1O00337 AC092666.2-201ENST00000613287 246 ntBASIC18.41■□□□□ 0.54
SLC28A1O00337 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC28A1O00337 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC28A1O00337 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A1O00337 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC28A1O00337 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
SLC28A1O00337 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A1O00337 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.4■□□□□ 0.54
SLC28A1O00337 NBPF21P-201ENST00000425093 1451 ntBASIC18.4■□□□□ 0.54
SLC28A1O00337 AC020763.4-201ENST00000623414 4170 ntBASIC18.4■□□□□ 0.54
SLC28A1O00337 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 TSPY21P-201ENST00000433481 731 ntBASIC18.4■□□□□ 0.54
SLC28A1O00337 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A1O00337 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A1O00337 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC28A1O00337 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.4■□□□□ 0.54
SLC28A1O00337 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC28A1O00337 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SLC28A1O00337 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC28A1O00337 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC28A1O00337 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.39■□□□□ 0.54
SLC28A1O00337 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SLC28A1O00337 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A1O00337 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.39■□□□□ 0.54
SLC28A1O00337 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A1O00337 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A1O00337 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A1O00337 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC28A1O00337 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC28A1O00337 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC28A1O00337 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC28A1O00337 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC28A1O00337 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC28A1O00337 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.39■□□□□ 0.53
SLC28A1O00337 AL160286.2-201ENST00000567150 934 ntBASIC18.39■□□□□ 0.53
SLC28A1O00337 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC28A1O00337 AC004264.1-201ENST00000608354 794 ntBASIC18.39■□□□□ 0.53
SLC28A1O00337 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.39■□□□□ 0.53
SLC28A1O00337 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC28A1O00337 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC28A1O00337 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SLC28A1O00337 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SLC28A1O00337 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC28A1O00337 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC28A1O00337 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC28A1O00337 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC28A1O00337 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC28A1O00337 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC28A1O00337 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC28A1O00337 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC28A1O00337 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms