Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC012618.2-201ENST00000428058 849 ntBASIC18.71■□□□□ 0.59
EIF3FO00303 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.71■□□□□ 0.59
EIF3FO00303 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.71■□□□□ 0.59
EIF3FO00303 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.71■□□□□ 0.59
EIF3FO00303 AP001412.1-201ENST00000608405 714 ntBASIC18.71■□□□□ 0.59
EIF3FO00303 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.71■□□□□ 0.59
EIF3FO00303 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.71■□□□□ 0.59
EIF3FO00303 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
EIF3FO00303 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.71■□□□□ 0.59
EIF3FO00303 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
EIF3FO00303 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
EIF3FO00303 RCC2P6-201ENST00000526625 1557 ntBASIC18.71■□□□□ 0.59
EIF3FO00303 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
EIF3FO00303 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EIF3FO00303 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
EIF3FO00303 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.71■□□□□ 0.58
EIF3FO00303 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
EIF3FO00303 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.71■□□□□ 0.58
EIF3FO00303 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
EIF3FO00303 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
EIF3FO00303 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EIF3FO00303 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
EIF3FO00303 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.7■□□□□ 0.58
EIF3FO00303 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.7■□□□□ 0.58
EIF3FO00303 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EIF3FO00303 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.7■□□□□ 0.58
EIF3FO00303 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.7■□□□□ 0.58
EIF3FO00303 CR392000.1-201ENST00000624770 1228 ntBASIC18.7■□□□□ 0.58
EIF3FO00303 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.7■□□□□ 0.58
EIF3FO00303 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.7■□□□□ 0.58
EIF3FO00303 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EIF3FO00303 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.7■□□□□ 0.58
EIF3FO00303 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.69■□□□□ 0.58
EIF3FO00303 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 TNXA-203ENST00000507684 2038 ntBASIC18.69■□□□□ 0.58
EIF3FO00303 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
EIF3FO00303 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.69■□□□□ 0.58
EIF3FO00303 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.69■□□□□ 0.58
EIF3FO00303 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
EIF3FO00303 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.69■□□□□ 0.58
EIF3FO00303 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
EIF3FO00303 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EIF3FO00303 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.69■□□□□ 0.58
EIF3FO00303 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 AC098818.2-201ENST00000564925 2320 ntBASIC18.68■□□□□ 0.58
EIF3FO00303 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
EIF3FO00303 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EIF3FO00303 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EIF3FO00303 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.68■□□□□ 0.58
EIF3FO00303 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.68■□□□□ 0.58
EIF3FO00303 AC091390.4-202ENST00000476426 537 ntBASIC18.68■□□□□ 0.58
EIF3FO00303 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.68■□□□□ 0.58
EIF3FO00303 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EIF3FO00303 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.68■□□□□ 0.58
EIF3FO00303 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms