Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC104076.2-201ENST00000448912 469 ntBASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC092720.2-201ENST00000602388 1665 ntBASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC004951.3-201ENST00000418645 1148 ntBASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 CCR12P-201ENST00000446203 998 ntBASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC087388.1-201ENST00000571370 1112 ntBASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 NTF6B-201ENST00000591913 560 ntBASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC116562.4-202ENST00000641738 218 ntBASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMX2-CTNND1H3BSU7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 HMGA1P5-201ENST00000412453 271 ntBASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 ECEL1P2-202ENST00000465689 757 ntBASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TMX2-CTNND1H3BSU7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC010203.1-204ENST00000548782 407 ntBASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC011298.2-201ENST00000617989 482 ntBASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms