Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM235A6NFC5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM235A6NFC5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 BCL2-203ENST00000589955 5011 ntBASIC16.33■□□□□ 0.2
TMEM235A6NFC5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM235A6NFC5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 AC034268.1-201ENST00000441047 882 ntBASIC16.32■□□□□ 0.2
TMEM235A6NFC5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM235A6NFC5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 AC016769.1-201ENST00000409132 1010 ntBASIC16.31■□□□□ 0.2
TMEM235A6NFC5 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 BID-214ENST00000617586 542 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.31■□□□□ 0.2
TMEM235A6NFC5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 NOC2LP2-201ENST00000407594 1944 ntBASIC16.31■□□□□ 0.2
TMEM235A6NFC5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TMEM235A6NFC5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 AC068880.1-201ENST00000507289 2297 ntBASIC16.3■□□□□ 0.2
TMEM235A6NFC5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM235A6NFC5 GPX1P1-201ENST00000388829 606 ntBASIC16.3■□□□□ 0.2
TMEM235A6NFC5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms