Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.56■□□□□ 0.08
RNF222A6NCQ9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RNF222A6NCQ9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 SDHAP1-207ENST00000440850 2000 ntBASIC15.55■□□□□ 0.08
RNF222A6NCQ9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 CYP21A1P-202ENST00000354927 1481 ntBASIC15.55■□□□□ 0.08
RNF222A6NCQ9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 MIR572-201ENST00000384983 95 ntBASIC15.55■□□□□ 0.08
RNF222A6NCQ9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF222A6NCQ9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L2-201ENST00000561772 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L6-201ENST00000626483 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L1-201ENST00000627662 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L8-201ENST00000629013 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L3-201ENST00000630187 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L7-201ENST00000630678 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 DUX4L5-201ENST00000630834 1275 ntBASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF222A6NCQ9 AC108860.2-201ENST00000562760 2183 ntBASIC15.53■□□□□ 0.08
RNF222A6NCQ9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF222A6NCQ9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms