Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF103-CHMP3A0A140T963 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 FZD10-202ENST00000539839 3282 ntBASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 GUSBP6-202ENST00000438529 1198 ntBASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC091874.3-201ENST00000512672 1195 ntBASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF103-CHMP3A0A140T963 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 AL390961.4-201ENST00000623958 2535 ntBASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC009113.1-201ENST00000570267 2443 ntBASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF103-CHMP3A0A140T963 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.39■□□□□ 0.54
RNF103-CHMP3A0A140T963 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF103-CHMP3A0A140T963 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF103-CHMP3A0A140T963 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 TFP1-202ENST00000475455 1573 ntBASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 TSPY6P-201ENST00000448518 926 ntBASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC006557.6-201ENST00000623071 864 ntBASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF103-CHMP3A0A140T963 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 NCF1B-203ENST00000435988 1254 ntBASIC18.38■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms