Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV4A0A0C4DH28 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 Z82202.1-201ENST00000623446 1880 ntBASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV4A0A0C4DH28 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 AC006058.3-201ENST00000606217 1069 ntBASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV4A0A0C4DH28 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV4A0A0C4DH28 KRASP1-201ENST00000407852 552 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms