Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 AC124283.5-201ENST00000624661 1809 ntBASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV5A0A0B4J249 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 AL390719.1-204ENST00000412397 1219 ntBASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 PCDHB18P-201ENST00000524813 2368 ntBASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 BICD1-207ENST00000551848 1962 ntBASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV5A0A0B4J249 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 FZD10-202ENST00000539839 3282 ntBASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 AC005181.1-201ENST00000604782 1256 ntBASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms