Protein–RNA interactions for Protein: Q9H4I9

SMDT1, Essential MCU regulator, mitochondrial, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1Q9H4I9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMDT1Q9H4I9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMDT1Q9H4I9 AP004833.2-201ENST00000532228 1454 ntBASIC20.02■□□□□ 0.8
SMDT1Q9H4I9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.01■□□□□ 0.79
SMDT1Q9H4I9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20■□□□□ 0.79
SMDT1Q9H4I9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMDT1Q9H4I9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMDT1Q9H4I9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMDT1Q9H4I9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SMDT1Q9H4I9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 DUSP8P4-201ENST00000399538 1761 ntBASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SMDT1Q9H4I9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 AC012676.1-201ENST00000574705 1949 ntBASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMDT1Q9H4I9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.83■□□□□ 0.77
SMDT1Q9H4I9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMDT1Q9H4I9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMDT1Q9H4I9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.81■□□□□ 0.76
SMDT1Q9H4I9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMDT1Q9H4I9 LINC00543-201ENST00000567234 1845 ntBASIC19.81■□□□□ 0.76
SMDT1Q9H4I9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms