Protein–RNA interactions for Protein: Q9H4I9

SMDT1, Essential MCU regulator, mitochondrial, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1Q9H4I9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SMDT1Q9H4I9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMDT1Q9H4I9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMDT1Q9H4I9 AP004833.2-201ENST00000532228 1454 ntBASIC20.02■□□□□ 0.8
SMDT1Q9H4I9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.01■□□□□ 0.79
SMDT1Q9H4I9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20■□□□□ 0.79
SMDT1Q9H4I9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMDT1Q9H4I9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMDT1Q9H4I9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMDT1Q9H4I9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMDT1Q9H4I9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMDT1Q9H4I9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMDT1Q9H4I9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SMDT1Q9H4I9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMDT1Q9H4I9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMDT1Q9H4I9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 DUSP8P4-201ENST00000399538 1761 ntBASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMDT1Q9H4I9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMDT1Q9H4I9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMDT1Q9H4I9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMDT1Q9H4I9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SMDT1Q9H4I9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMDT1Q9H4I9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 AC012676.1-201ENST00000574705 1949 ntBASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SMDT1Q9H4I9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMDT1Q9H4I9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMDT1Q9H4I9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.85■□□□□ 0.77
SMDT1Q9H4I9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMDT1Q9H4I9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.83■□□□□ 0.77
SMDT1Q9H4I9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMDT1Q9H4I9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMDT1Q9H4I9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMDT1Q9H4I9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.81■□□□□ 0.76
SMDT1Q9H4I9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMDT1Q9H4I9 LINC00543-201ENST00000567234 1845 ntBASIC19.81■□□□□ 0.76
SMDT1Q9H4I9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms