Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.77■□□□□ 0.76
TRGV9Q99603 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRGV9Q99603 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.77■□□□□ 0.76
TRGV9Q99603 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TRGV9Q99603 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV9Q99603 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV9Q99603 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.76■□□□□ 0.75
TRGV9Q99603 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.76■□□□□ 0.75
TRGV9Q99603 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV9Q99603 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRGV9Q99603 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TRGV9Q99603 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV9Q99603 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.75■□□□□ 0.75
TRGV9Q99603 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.75■□□□□ 0.75
TRGV9Q99603 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.75■□□□□ 0.75
TRGV9Q99603 AC135983.2-203ENST00000454486 1613 ntBASIC19.75■□□□□ 0.75
TRGV9Q99603 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.75■□□□□ 0.75
TRGV9Q99603 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV9Q99603 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV9Q99603 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV9Q99603 AC005559.1-201ENST00000589661 871 ntBASIC19.74■□□□□ 0.75
TRGV9Q99603 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV9Q99603 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.73■□□□□ 0.75
TRGV9Q99603 AC018358.1-201ENST00000631079 1402 ntBASIC19.73■□□□□ 0.75
TRGV9Q99603 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRGV9Q99603 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRGV9Q99603 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRGV9Q99603 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TRGV9Q99603 AC108673.1-201ENST00000510422 1159 ntBASIC19.72■□□□□ 0.75
TRGV9Q99603 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.72■□□□□ 0.75
TRGV9Q99603 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRGV9Q99603 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRGV9Q99603 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.71■□□□□ 0.75
TRGV9Q99603 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.71■□□□□ 0.75
TRGV9Q99603 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.71■□□□□ 0.75
TRGV9Q99603 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRGV9Q99603 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRGV9Q99603 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRGV9Q99603 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.7■□□□□ 0.74
TRGV9Q99603 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRGV9Q99603 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.69■□□□□ 0.74
TRGV9Q99603 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRGV9Q99603 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.69■□□□□ 0.74
TRGV9Q99603 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRGV9Q99603 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRGV9Q99603 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRGV9Q99603 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.68■□□□□ 0.74
TRGV9Q99603 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRGV9Q99603 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRGV9Q99603 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRGV9Q99603 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV9Q99603 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV9Q99603 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV9Q99603 WHAMMP2-203ENST00000563942 1603 ntBASIC19.67■□□□□ 0.74
TRGV9Q99603 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV9Q99603 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV9Q99603 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.67■□□□□ 0.74
TRGV9Q99603 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.67■□□□□ 0.74
TRGV9Q99603 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV9Q99603 SUZ12P1-203ENST00000578195 985 ntBASIC19.66■□□□□ 0.74
TRGV9Q99603 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRGV9Q99603 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRGV9Q99603 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRGV9Q99603 LINC00273-201ENST00000539813 1452 ntBASIC19.66■□□□□ 0.74
TRGV9Q99603 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRGV9Q99603 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRGV9Q99603 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRGV9Q99603 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRGV9Q99603 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV9Q99603 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV9Q99603 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV9Q99603 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV9Q99603 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRGV9Q99603 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV9Q99603 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRGV9Q99603 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRGV9Q99603 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRGV9Q99603 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.62■□□□□ 0.73
TRGV9Q99603 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 MIR6090-201ENST00000622481 60 ntBASIC19.62■□□□□ 0.73
TRGV9Q99603 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRGV9Q99603 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV9Q99603 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV9Q99603 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV9Q99603 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV9Q99603 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV9Q99603 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV9Q99603 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRGV9Q99603 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV9Q99603 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRGV9Q99603 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRGV9Q99603 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.6■□□□□ 0.73
TRGV9Q99603 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRGV9Q99603 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV9Q99603 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms