Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.78■■■□□ 2.2
CDHR1Q96JP9 AL139393.2-201ENST00000608721 2025 ntBASIC28.77■■■□□ 2.2
CDHR1Q96JP9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 AC148477.6-201ENST00000623746 465 ntBASIC28.77■■■□□ 2.2
CDHR1Q96JP9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDHR1Q96JP9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
CDHR1Q96JP9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CDHR1Q96JP9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.76■■■□□ 2.19
CDHR1Q96JP9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDHR1Q96JP9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDHR1Q96JP9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.75■■■□□ 2.19
CDHR1Q96JP9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.74■■■□□ 2.19
CDHR1Q96JP9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.74■■■□□ 2.19
CDHR1Q96JP9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.74■■■□□ 2.19
CDHR1Q96JP9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDHR1Q96JP9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDHR1Q96JP9 ABCB10P1-201ENST00000614297 2181 ntBASIC28.73■■■□□ 2.19
CDHR1Q96JP9 AC100797.4-201ENST00000631653 1827 ntBASIC28.73■■■□□ 2.19
CDHR1Q96JP9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CDHR1Q96JP9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CDHR1Q96JP9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CDHR1Q96JP9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.71■■■□□ 2.19
CDHR1Q96JP9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.71■■■□□ 2.19
CDHR1Q96JP9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
CDHR1Q96JP9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CDHR1Q96JP9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.7■■■□□ 2.19
CDHR1Q96JP9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CDHR1Q96JP9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
CDHR1Q96JP9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.7■■■□□ 2.18
CDHR1Q96JP9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.7■■■□□ 2.18
CDHR1Q96JP9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CDHR1Q96JP9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.69■■■□□ 2.18
CDHR1Q96JP9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CDHR1Q96JP9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDHR1Q96JP9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
CDHR1Q96JP9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDHR1Q96JP9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
CDHR1Q96JP9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDHR1Q96JP9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
CDHR1Q96JP9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.66■■■□□ 2.18
CDHR1Q96JP9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.66■■■□□ 2.18
CDHR1Q96JP9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDHR1Q96JP9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.65■■■□□ 2.18
CDHR1Q96JP9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDHR1Q96JP9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDHR1Q96JP9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDHR1Q96JP9 MIR219A2-201ENST00000608502 1504 ntBASIC28.64■■■□□ 2.18
CDHR1Q96JP9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDHR1Q96JP9 GPX1-201ENST00000419349 1106 ntBASIC28.64■■■□□ 2.18
CDHR1Q96JP9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
CDHR1Q96JP9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDHR1Q96JP9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.63■■■□□ 2.17
CDHR1Q96JP9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.63■■■□□ 2.17
CDHR1Q96JP9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDHR1Q96JP9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.62■■■□□ 2.17
CDHR1Q96JP9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDHR1Q96JP9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDHR1Q96JP9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDHR1Q96JP9 ABCB10P3-201ENST00000561950 2166 ntBASIC28.61■■■□□ 2.17
CDHR1Q96JP9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.61■■■□□ 2.17
CDHR1Q96JP9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDHR1Q96JP9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.61■■■□□ 2.17
CDHR1Q96JP9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDHR1Q96JP9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDHR1Q96JP9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
CDHR1Q96JP9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
CDHR1Q96JP9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CDHR1Q96JP9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDHR1Q96JP9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CDHR1Q96JP9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 AC022413.1-201ENST00000624602 984 ntBASIC28.58■■■□□ 2.17
CDHR1Q96JP9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
CDHR1Q96JP9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDHR1Q96JP9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.57■■■□□ 2.16
CDHR1Q96JP9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CDHR1Q96JP9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CDHR1Q96JP9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDHR1Q96JP9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDHR1Q96JP9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
CDHR1Q96JP9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.56■■■□□ 2.16
CDHR1Q96JP9 RNF126P1-201ENST00000567452 1320 ntBASIC28.55■■■□□ 2.16
CDHR1Q96JP9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.55■■■□□ 2.16
CDHR1Q96JP9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDHR1Q96JP9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CDHR1Q96JP9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDHR1Q96JP9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.52■■■□□ 2.16
CDHR1Q96JP9 RARRES2P2-201ENST00000394842 485 ntBASIC28.52■■■□□ 2.16
CDHR1Q96JP9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDHR1Q96JP9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms