Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NAF1Q96HR8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NAF1Q96HR8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
NAF1Q96HR8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NAF1Q96HR8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.34■■□□□ 1.65
NAF1Q96HR8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NAF1Q96HR8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NAF1Q96HR8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NAF1Q96HR8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
NAF1Q96HR8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
NAF1Q96HR8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NAF1Q96HR8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.31■■□□□ 1.64
NAF1Q96HR8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NAF1Q96HR8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NAF1Q96HR8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NAF1Q96HR8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.29■■□□□ 1.64
NAF1Q96HR8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NAF1Q96HR8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NAF1Q96HR8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.28■■□□□ 1.64
NAF1Q96HR8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NAF1Q96HR8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NAF1Q96HR8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NAF1Q96HR8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
NAF1Q96HR8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
NAF1Q96HR8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NAF1Q96HR8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.25■■□□□ 1.63
NAF1Q96HR8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NAF1Q96HR8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NAF1Q96HR8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
NAF1Q96HR8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NAF1Q96HR8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NAF1Q96HR8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
NAF1Q96HR8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.23■■□□□ 1.63
NAF1Q96HR8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NAF1Q96HR8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NAF1Q96HR8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.22■■□□□ 1.63
NAF1Q96HR8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NAF1Q96HR8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.22■■□□□ 1.63
NAF1Q96HR8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NAF1Q96HR8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NAF1Q96HR8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NAF1Q96HR8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
NAF1Q96HR8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.19■■□□□ 1.62
NAF1Q96HR8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
NAF1Q96HR8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
NAF1Q96HR8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.17■■□□□ 1.62
NAF1Q96HR8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
NAF1Q96HR8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.17■■□□□ 1.62
NAF1Q96HR8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.16■■□□□ 1.62
NAF1Q96HR8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NAF1Q96HR8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NAF1Q96HR8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.15■■□□□ 1.62
NAF1Q96HR8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NAF1Q96HR8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NAF1Q96HR8 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L13-201ENST00000554103 1267 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L15-201ENST00000611059 1267 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L23-201ENST00000615195 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L24-201ENST00000617576 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L22-201ENST00000618238 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L20-201ENST00000619712 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L21-201ENST00000622058 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L10-201ENST00000622460 1267 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L25-201ENST00000624915 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NAF1Q96HR8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.14■■□□□ 1.61
NAF1Q96HR8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
NAF1Q96HR8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.13■■□□□ 1.61
NAF1Q96HR8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
NAF1Q96HR8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NAF1Q96HR8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NAF1Q96HR8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NAF1Q96HR8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.12■■□□□ 1.61
NAF1Q96HR8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms