Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYNE2Q8WXH0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC10.82□□□□□ -0.68
SYNE2Q8WXH0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC10.82□□□□□ -0.68
SYNE2Q8WXH0 GRAMD4P7-201ENST00000578182 1232 ntBASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 ANKRD20A6P-201ENST00000618763 204 ntBASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 YBX1P4-201ENST00000392794 808 ntBASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC10.81□□□□□ -0.68
SYNE2Q8WXH0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 AL136116.3-201ENST00000402907 1138 ntBASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 AC092296.2-201ENST00000589470 999 ntBASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SYNE2Q8WXH0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 KRT125P-201ENST00000546827 989 ntBASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SYNE2Q8WXH0 AC103724.3-201ENST00000564481 992 ntBASIC10.78□□□□□ -0.68
SYNE2Q8WXH0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC10.78□□□□□ -0.68
SYNE2Q8WXH0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SYNE2Q8WXH0 AC026202.3-201ENST00000600805 1127 ntBASIC10.78□□□□□ -0.68
SYNE2Q8WXH0 MIR4787-201ENST00000607364 84 ntBASIC10.78□□□□□ -0.68
SYNE2Q8WXH0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SYNE2Q8WXH0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SYNE2Q8WXH0 AC096631.2-201ENST00000436136 790 ntBASIC10.77□□□□□ -0.68
SYNE2Q8WXH0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SYNE2Q8WXH0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYNE2Q8WXH0 AC148477.6-201ENST00000623746 465 ntBASIC10.77□□□□□ -0.69
SYNE2Q8WXH0 AC139795.1-202ENST00000500444 432 ntBASIC10.77□□□□□ -0.69
SYNE2Q8WXH0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 AL162430.1-201ENST00000480705 870 ntBASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC10.76□□□□□ -0.69
SYNE2Q8WXH0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC10.75□□□□□ -0.69
SYNE2Q8WXH0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 AC133552.2-201ENST00000619106 1032 ntBASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC10.74□□□□□ -0.69
SYNE2Q8WXH0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SYNE2Q8WXH0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SYNE2Q8WXH0 DUX4L9-201ENST00000449051 1259 ntBASIC10.73□□□□□ -0.69
SYNE2Q8WXH0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC10.73□□□□□ -0.69
SYNE2Q8WXH0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SYNE2Q8WXH0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SYNE2Q8WXH0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 AC133561.4-201ENST00000566112 224 ntBASIC10.72□□□□□ -0.69
SYNE2Q8WXH0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 KRT16P3-201ENST00000439127 1283 ntBASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 AC105265.2-201ENST00000467189 838 ntBASIC10.71□□□□□ -0.69
SYNE2Q8WXH0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms