Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.04■□□□□ 0.8
LINC01006Q8NI28 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC01006Q8NI28 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LINC01006Q8NI28 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.03■□□□□ 0.8
LINC01006Q8NI28 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.03■□□□□ 0.8
LINC01006Q8NI28 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01006Q8NI28 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01006Q8NI28 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC01006Q8NI28 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01006Q8NI28 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LINC01006Q8NI28 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.01■□□□□ 0.79
LINC01006Q8NI28 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01006Q8NI28 U85056.1-201ENST00000616429 682 ntBASIC20.01■□□□□ 0.79
LINC01006Q8NI28 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC01006Q8NI28 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01006Q8NI28 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01006Q8NI28 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01006Q8NI28 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC01006Q8NI28 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01006Q8NI28 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC01006Q8NI28 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01006Q8NI28 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01006Q8NI28 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC01006Q8NI28 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01006Q8NI28 AC092296.2-201ENST00000589470 999 ntBASIC19.99■□□□□ 0.79
LINC01006Q8NI28 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01006Q8NI28 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01006Q8NI28 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC01006Q8NI28 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
LINC01006Q8NI28 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01006Q8NI28 AC018358.1-201ENST00000631079 1402 ntBASIC19.97■□□□□ 0.79
LINC01006Q8NI28 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC01006Q8NI28 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LINC01006Q8NI28 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 AC126177.7-201ENST00000547904 679 ntBASIC19.96■□□□□ 0.79
LINC01006Q8NI28 AL033527.3-201ENST00000566366 1196 ntBASIC19.96■□□□□ 0.79
LINC01006Q8NI28 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01006Q8NI28 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.95■□□□□ 0.78
LINC01006Q8NI28 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01006Q8NI28 ECEL1P2-201ENST00000461596 1295 ntBASIC19.95■□□□□ 0.78
LINC01006Q8NI28 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.95■□□□□ 0.78
LINC01006Q8NI28 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01006Q8NI28 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01006Q8NI28 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01006Q8NI28 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.94■□□□□ 0.78
LINC01006Q8NI28 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LINC01006Q8NI28 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LINC01006Q8NI28 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01006Q8NI28 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LINC01006Q8NI28 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01006Q8NI28 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.93■□□□□ 0.78
LINC01006Q8NI28 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01006Q8NI28 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LINC01006Q8NI28 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01006Q8NI28 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01006Q8NI28 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01006Q8NI28 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01006Q8NI28 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01006Q8NI28 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.91■□□□□ 0.78
LINC01006Q8NI28 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01006Q8NI28 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LINC01006Q8NI28 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01006Q8NI28 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01006Q8NI28 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01006Q8NI28 KRT18P60-201ENST00000312876 1297 ntBASIC19.89■□□□□ 0.77
LINC01006Q8NI28 AP004833.2-201ENST00000532228 1454 ntBASIC19.89■□□□□ 0.77
LINC01006Q8NI28 ST7-AS1-201ENST00000456775 1889 ntBASIC19.88■□□□□ 0.77
LINC01006Q8NI28 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01006Q8NI28 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01006Q8NI28 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01006Q8NI28 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01006Q8NI28 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LINC01006Q8NI28 TSPY13P-201ENST00000338964 914 ntBASIC19.87■□□□□ 0.77
LINC01006Q8NI28 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.87■□□□□ 0.77
LINC01006Q8NI28 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01006Q8NI28 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01006Q8NI28 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.87■□□□□ 0.77
LINC01006Q8NI28 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.86■□□□□ 0.77
LINC01006Q8NI28 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.86■□□□□ 0.77
LINC01006Q8NI28 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.86■□□□□ 0.77
LINC01006Q8NI28 AC004987.1-201ENST00000428627 508 ntBASIC19.85■□□□□ 0.77
LINC01006Q8NI28 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01006Q8NI28 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms