Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
COPS6Q7L5N1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
COPS6Q7L5N1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
COPS6Q7L5N1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
COPS6Q7L5N1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.79
COPS6Q7L5N1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.5■■■□□ 2.79
COPS6Q7L5N1 AP004833.2-201ENST00000532228 1454 ntBASIC32.5■■■□□ 2.79
COPS6Q7L5N1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.5■■■□□ 2.79
COPS6Q7L5N1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.5■■■□□ 2.79
COPS6Q7L5N1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COPS6Q7L5N1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.49■■■□□ 2.79
COPS6Q7L5N1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
COPS6Q7L5N1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COPS6Q7L5N1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COPS6Q7L5N1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.47■■■□□ 2.79
COPS6Q7L5N1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COPS6Q7L5N1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
COPS6Q7L5N1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.46■■■□□ 2.79
COPS6Q7L5N1 AC148477.6-201ENST00000623746 465 ntBASIC32.46■■■□□ 2.79
COPS6Q7L5N1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.46■■■□□ 2.79
COPS6Q7L5N1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.45■■■□□ 2.79
COPS6Q7L5N1 AC100797.4-201ENST00000631653 1827 ntBASIC32.45■■■□□ 2.79
COPS6Q7L5N1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
COPS6Q7L5N1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.45■■■□□ 2.79
COPS6Q7L5N1 RARRES2P2-201ENST00000394842 485 ntBASIC32.45■■■□□ 2.79
COPS6Q7L5N1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
COPS6Q7L5N1 AC022413.1-201ENST00000624602 984 ntBASIC32.44■■■□□ 2.78
COPS6Q7L5N1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
COPS6Q7L5N1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
COPS6Q7L5N1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
COPS6Q7L5N1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.42■■■□□ 2.78
COPS6Q7L5N1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.41■■■□□ 2.78
COPS6Q7L5N1 RNF126P1-201ENST00000567452 1320 ntBASIC32.41■■■□□ 2.78
COPS6Q7L5N1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
COPS6Q7L5N1 MIR219A2-201ENST00000608502 1504 ntBASIC32.4■■■□□ 2.78
COPS6Q7L5N1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
COPS6Q7L5N1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.39■■■□□ 2.78
COPS6Q7L5N1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.39■■■□□ 2.78
COPS6Q7L5N1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
COPS6Q7L5N1 AL139393.2-201ENST00000608721 2025 ntBASIC32.39■■■□□ 2.78
COPS6Q7L5N1 ABCB10P1-201ENST00000614297 2181 ntBASIC32.39■■■□□ 2.78
COPS6Q7L5N1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.38■■■□□ 2.77
COPS6Q7L5N1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.38■■■□□ 2.77
COPS6Q7L5N1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.38■■■□□ 2.77
COPS6Q7L5N1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COPS6Q7L5N1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.37■■■□□ 2.77
COPS6Q7L5N1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COPS6Q7L5N1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COPS6Q7L5N1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.37■■■□□ 2.77
COPS6Q7L5N1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
COPS6Q7L5N1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
COPS6Q7L5N1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.34■■■□□ 2.77
COPS6Q7L5N1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.34■■■□□ 2.77
COPS6Q7L5N1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.34■■■□□ 2.77
COPS6Q7L5N1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
COPS6Q7L5N1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
COPS6Q7L5N1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.33■■■□□ 2.77
COPS6Q7L5N1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
COPS6Q7L5N1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.77
COPS6Q7L5N1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.32■■■□□ 2.77
COPS6Q7L5N1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
COPS6Q7L5N1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.32■■■□□ 2.76
COPS6Q7L5N1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
COPS6Q7L5N1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
COPS6Q7L5N1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COPS6Q7L5N1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COPS6Q7L5N1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
COPS6Q7L5N1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
COPS6Q7L5N1 AC060814.1-201ENST00000554326 538 ntBASIC32.28■■■□□ 2.76
COPS6Q7L5N1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
COPS6Q7L5N1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
COPS6Q7L5N1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
COPS6Q7L5N1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
COPS6Q7L5N1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
COPS6Q7L5N1 ABCB10P3-201ENST00000561950 2166 ntBASIC32.26■■■□□ 2.76
COPS6Q7L5N1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
COPS6Q7L5N1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
COPS6Q7L5N1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.25■■■□□ 2.75
COPS6Q7L5N1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
COPS6Q7L5N1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.25■■■□□ 2.75
COPS6Q7L5N1 ABHD17AP5-201ENST00000580133 923 ntBASIC32.25■■■□□ 2.75
COPS6Q7L5N1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
COPS6Q7L5N1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
COPS6Q7L5N1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
COPS6Q7L5N1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.22■■■□□ 2.75
COPS6Q7L5N1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
COPS6Q7L5N1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.22■■■□□ 2.75
COPS6Q7L5N1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COPS6Q7L5N1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.21■■■□□ 2.75
COPS6Q7L5N1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.2■■■□□ 2.75
COPS6Q7L5N1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
COPS6Q7L5N1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.2■■■□□ 2.75
COPS6Q7L5N1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
COPS6Q7L5N1 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms