Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COLCA1Q6ZS62 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COLCA1Q6ZS62 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COLCA1Q6ZS62 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
COLCA1Q6ZS62 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COLCA1Q6ZS62 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COLCA1Q6ZS62 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.97■■□□□ 1.11
COLCA1Q6ZS62 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COLCA1Q6ZS62 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COLCA1Q6ZS62 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COLCA1Q6ZS62 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.96■■□□□ 1.11
COLCA1Q6ZS62 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.95■■□□□ 1.11
COLCA1Q6ZS62 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
COLCA1Q6ZS62 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COLCA1Q6ZS62 BX255925.1-201ENST00000566954 1854 ntBASIC21.95■■□□□ 1.1
COLCA1Q6ZS62 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COLCA1Q6ZS62 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COLCA1Q6ZS62 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.93■■□□□ 1.1
COLCA1Q6ZS62 LINC01003-201ENST00000564834 1764 ntBASIC21.93■■□□□ 1.1
COLCA1Q6ZS62 LINC01971-201ENST00000617888 1048 ntBASIC21.93■■□□□ 1.1
COLCA1Q6ZS62 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
COLCA1Q6ZS62 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
COLCA1Q6ZS62 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COLCA1Q6ZS62 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COLCA1Q6ZS62 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.91■■□□□ 1.1
COLCA1Q6ZS62 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COLCA1Q6ZS62 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COLCA1Q6ZS62 AC018358.1-201ENST00000631079 1402 ntBASIC21.9■■□□□ 1.1
COLCA1Q6ZS62 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.9■■□□□ 1.1
COLCA1Q6ZS62 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.9■■□□□ 1.1
COLCA1Q6ZS62 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COLCA1Q6ZS62 AC110285.7-201ENST00000624417 1536 ntBASIC21.9■■□□□ 1.1
COLCA1Q6ZS62 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COLCA1Q6ZS62 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COLCA1Q6ZS62 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COLCA1Q6ZS62 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COLCA1Q6ZS62 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.88■■□□□ 1.09
COLCA1Q6ZS62 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.87■■□□□ 1.09
COLCA1Q6ZS62 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
COLCA1Q6ZS62 ZNRF2P2-203ENST00000454624 420 ntBASIC21.87■■□□□ 1.09
COLCA1Q6ZS62 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.87■■□□□ 1.09
COLCA1Q6ZS62 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COLCA1Q6ZS62 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COLCA1Q6ZS62 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COLCA1Q6ZS62 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.86■■□□□ 1.09
COLCA1Q6ZS62 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COLCA1Q6ZS62 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.86■■□□□ 1.09
COLCA1Q6ZS62 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COLCA1Q6ZS62 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.85■■□□□ 1.09
COLCA1Q6ZS62 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COLCA1Q6ZS62 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
COLCA1Q6ZS62 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COLCA1Q6ZS62 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COLCA1Q6ZS62 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.84■■□□□ 1.09
COLCA1Q6ZS62 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 ABHD17AP4-201ENST00000411545 909 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L13-201ENST00000554103 1267 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L15-201ENST00000611059 1267 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L23-201ENST00000615195 1269 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L24-201ENST00000617576 1269 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L22-201ENST00000618238 1269 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L20-201ENST00000619712 1269 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L21-201ENST00000622058 1269 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L10-201ENST00000622460 1267 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 DUX4L25-201ENST00000624915 1269 ntBASIC21.83■■□□□ 1.09
COLCA1Q6ZS62 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COLCA1Q6ZS62 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COLCA1Q6ZS62 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
COLCA1Q6ZS62 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 DUX4L11-201ENST00000611504 1267 ntBASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 DUX4L12-201ENST00000614593 1267 ntBASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 DUX4L14-201ENST00000621227 1267 ntBASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COLCA1Q6ZS62 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COLCA1Q6ZS62 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COLCA1Q6ZS62 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COLCA1Q6ZS62 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COLCA1Q6ZS62 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms