Protein–RNA interactions for Protein: Q6ZRS4

CCDC129, Coiled-coil domain-containing protein 129, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC129Q6ZRS4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC129Q6ZRS4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC129Q6ZRS4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L13-201ENST00000554103 1267 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L15-201ENST00000611059 1267 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L23-201ENST00000615195 1269 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L24-201ENST00000617576 1269 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L22-201ENST00000618238 1269 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L20-201ENST00000619712 1269 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L21-201ENST00000622058 1269 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L10-201ENST00000622460 1267 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 DUX4L25-201ENST00000624915 1269 ntBASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC129Q6ZRS4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC129Q6ZRS4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 CR559946.2-201ENST00000623684 991 ntBASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC129Q6ZRS4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC129Q6ZRS4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC129Q6ZRS4 AC110285.7-201ENST00000624417 1536 ntBASIC30.61■■■□□ 2.49
CCDC129Q6ZRS4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC129Q6ZRS4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.6■■■□□ 2.49
CCDC129Q6ZRS4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
CCDC129Q6ZRS4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CCDC129Q6ZRS4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.58■■■□□ 2.49
CCDC129Q6ZRS4 MIR3648-2-201ENST00000581792 180 ntBASIC30.57■■■□□ 2.48
CCDC129Q6ZRS4 MIR3648-1-201ENST00000615959 180 ntBASIC30.57■■■□□ 2.48
CCDC129Q6ZRS4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.57■■■□□ 2.48
CCDC129Q6ZRS4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.57■■■□□ 2.48
CCDC129Q6ZRS4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.56■■■□□ 2.48
CCDC129Q6ZRS4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC129Q6ZRS4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC129Q6ZRS4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC129Q6ZRS4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC129Q6ZRS4 AC016575.1-201ENST00000607026 382 ntBASIC30.54■■■□□ 2.48
CCDC129Q6ZRS4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC129Q6ZRS4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC129Q6ZRS4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.53■■■□□ 2.48
CCDC129Q6ZRS4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.53■■■□□ 2.48
CCDC129Q6ZRS4 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.52■■■□□ 2.48
CCDC129Q6ZRS4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.52■■■□□ 2.48
CCDC129Q6ZRS4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.52■■■□□ 2.48
CCDC129Q6ZRS4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CCDC129Q6ZRS4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC129Q6ZRS4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC129Q6ZRS4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC129Q6ZRS4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.51■■■□□ 2.47
CCDC129Q6ZRS4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC129Q6ZRS4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CCDC129Q6ZRS4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC129Q6ZRS4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CCDC129Q6ZRS4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.5■■■□□ 2.47
CCDC129Q6ZRS4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC129Q6ZRS4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC129Q6ZRS4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC129Q6ZRS4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC129Q6ZRS4 AP002414.2-202ENST00000590929 1450 ntBASIC30.49■■■□□ 2.47
CCDC129Q6ZRS4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC129Q6ZRS4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC129Q6ZRS4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC129Q6ZRS4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.47■■■□□ 2.47
CCDC129Q6ZRS4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC129Q6ZRS4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC129Q6ZRS4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CCDC129Q6ZRS4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC129Q6ZRS4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC129Q6ZRS4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC129Q6ZRS4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC129Q6ZRS4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.44■■■□□ 2.46
CCDC129Q6ZRS4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.44■■■□□ 2.46
CCDC129Q6ZRS4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.44■■■□□ 2.46
CCDC129Q6ZRS4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC129Q6ZRS4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC129Q6ZRS4 AC142086.6-201ENST00000621154 1765 ntBASIC30.43■■■□□ 2.46
CCDC129Q6ZRS4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC129Q6ZRS4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.42■■■□□ 2.46
CCDC129Q6ZRS4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.42■■■□□ 2.46
CCDC129Q6ZRS4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCDC129Q6ZRS4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC129Q6ZRS4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
CCDC129Q6ZRS4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.4■■■□□ 2.46
CCDC129Q6ZRS4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC129Q6ZRS4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC129Q6ZRS4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC129Q6ZRS4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.39■■■□□ 2.46
CCDC129Q6ZRS4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms