Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ATP2B3Q16720 AC008813.1-201ENST00000536597 885 ntBASIC31.34■■■□□ 2.61
ATP2B3Q16720 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ATP2B3Q16720 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.33■■■□□ 2.61
ATP2B3Q16720 AC100797.4-201ENST00000631653 1827 ntBASIC31.33■■■□□ 2.61
ATP2B3Q16720 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ATP2B3Q16720 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.33■■■□□ 2.61
ATP2B3Q16720 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.33■■■□□ 2.61
ATP2B3Q16720 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ATP2B3Q16720 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ATP2B3Q16720 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ATP2B3Q16720 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
ATP2B3Q16720 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
ATP2B3Q16720 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.32■■■□□ 2.61
ATP2B3Q16720 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.32■■■□□ 2.61
ATP2B3Q16720 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.32■■■□□ 2.6
ATP2B3Q16720 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ATP2B3Q16720 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.31■■■□□ 2.6
ATP2B3Q16720 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.3■■■□□ 2.6
ATP2B3Q16720 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ATP2B3Q16720 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ATP2B3Q16720 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.3■■■□□ 2.6
ATP2B3Q16720 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.3■■■□□ 2.6
ATP2B3Q16720 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ATP2B3Q16720 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ATP2B3Q16720 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.29■■■□□ 2.6
ATP2B3Q16720 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ATP2B3Q16720 HSD17B1P1-201ENST00000590052 955 ntBASIC31.29■■■□□ 2.6
ATP2B3Q16720 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ATP2B3Q16720 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ATP2B3Q16720 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ATP2B3Q16720 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ATP2B3Q16720 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ATP2B3Q16720 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.27■■■□□ 2.6
ATP2B3Q16720 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ATP2B3Q16720 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ATP2B3Q16720 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.25■■■□□ 2.59
ATP2B3Q16720 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
ATP2B3Q16720 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ATP2B3Q16720 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.24■■■□□ 2.59
ATP2B3Q16720 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.23■■■□□ 2.59
ATP2B3Q16720 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.23■■■□□ 2.59
ATP2B3Q16720 ABCB10P3-201ENST00000561950 2166 ntBASIC31.23■■■□□ 2.59
ATP2B3Q16720 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
ATP2B3Q16720 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
ATP2B3Q16720 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.22■■■□□ 2.59
ATP2B3Q16720 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
ATP2B3Q16720 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
ATP2B3Q16720 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ATP2B3Q16720 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
ATP2B3Q16720 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ATP2B3Q16720 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.2■■■□□ 2.59
ATP2B3Q16720 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.2■■■□□ 2.59
ATP2B3Q16720 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ATP2B3Q16720 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
ATP2B3Q16720 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ATP2B3Q16720 AC148477.6-201ENST00000623746 465 ntBASIC31.19■■■□□ 2.58
ATP2B3Q16720 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ATP2B3Q16720 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.18■■■□□ 2.58
ATP2B3Q16720 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ATP2B3Q16720 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ATP2B3Q16720 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.17■■■□□ 2.58
ATP2B3Q16720 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.17■■■□□ 2.58
ATP2B3Q16720 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
ATP2B3Q16720 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ATP2B3Q16720 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ATP2B3Q16720 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ATP2B3Q16720 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ATP2B3Q16720 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
ATP2B3Q16720 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ATP2B3Q16720 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.14■■■□□ 2.58
ATP2B3Q16720 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.13■■■□□ 2.57
ATP2B3Q16720 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.13■■■□□ 2.57
ATP2B3Q16720 MIR219A2-201ENST00000608502 1504 ntBASIC31.13■■■□□ 2.57
ATP2B3Q16720 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ATP2B3Q16720 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ATP2B3Q16720 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.12■■■□□ 2.57
ATP2B3Q16720 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.12■■■□□ 2.57
ATP2B3Q16720 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.12■■■□□ 2.57
ATP2B3Q16720 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.12■■■□□ 2.57
ATP2B3Q16720 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.12■■■□□ 2.57
ATP2B3Q16720 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B3Q16720 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B3Q16720 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
ATP2B3Q16720 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B3Q16720 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
ATP2B3Q16720 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B3Q16720 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B3Q16720 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B3Q16720 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ATP2B3Q16720 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ATP2B3Q16720 GPX1-201ENST00000419349 1106 ntBASIC31.09■■■□□ 2.57
ATP2B3Q16720 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ATP2B3Q16720 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ATP2B3Q16720 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.09■■■□□ 2.57
ATP2B3Q16720 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
ATP2B3Q16720 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.57
ATP2B3Q16720 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.07■■■□□ 2.56
ATP2B3Q16720 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.06■■■□□ 2.56
ATP2B3Q16720 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms