Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 LRO1YNR008W 1986 nt8.5□□□□□ -1.05
UBP3Q01477 YEL023CYEL023C 2049 nt8.49□□□□□ -1.05
UBP3Q01477 RHO1YPR165W 630 nt8.49□□□□□ -1.05
UBP3Q01477 ARP10YDR106W 855 nt8.48□□□□□ -1.05
UBP3Q01477 UTR5YEL035C 501 nt8.48□□□□□ -1.05
UBP3Q01477 YHC3YJL059W 1227 nt8.48□□□□□ -1.05
UBP3Q01477 BXI1YNL305C 894 nt8.48□□□□□ -1.05 RIP-Chip
UBP3Q01477 RCR1YBR005W 642 nt8.48□□□□□ -1.05 RIP-Chip
UBP3Q01477 YER156CYER156C 1017 nt8.47□□□□□ -1.05
UBP3Q01477 HIS3YOR202W 663 nt8.47□□□□□ -1.05
UBP3Q01477 YPL071CYPL071C 471 nt8.47□□□□□ -1.05
UBP3Q01477 HMT1YBR034C 1047 nt8.46□□□□□ -1.06
UBP3Q01477 RPS6AYPL090C 711 nt8.46□□□□□ -1.06
UBP3Q01477 RPS6BYBR181C 711 nt8.46□□□□□ -1.06
UBP3Q01477 THI73YLR004C 1572 nt8.45□□□□□ -1.06
UBP3Q01477 DIP5YPL265W 1827 nt8.43□□□□□ -1.06
UBP3Q01477 MET30YIL046W 1923 nt8.43□□□□□ -1.06
UBP3Q01477 PUP3YER094C 618 nt8.43□□□□□ -1.06
UBP3Q01477 UTP6YDR449C 1323 nt8.43□□□□□ -1.06
UBP3Q01477 HXT8YJL214W 1710 nt8.43□□□□□ -1.06
UBP3Q01477 PZF1YPR186C 1290 nt8.42□□□□□ -1.06
UBP3Q01477 GCD11YER025W 1584 nt8.42□□□□□ -1.06
UBP3Q01477 INO1YJL153C 1602 nt8.42□□□□□ -1.06
UBP3Q01477 NPL6YMR091C 1308 nt8.41□□□□□ -1.06
UBP3Q01477 MIM1YOL026C 342 nt8.41□□□□□ -1.06
UBP3Q01477 ATP2YJR121W 1536 nt8.4□□□□□ -1.06 RIP-Chip
UBP3Q01477 DUR3YHL016C 2208 nt8.4□□□□□ -1.06
UBP3Q01477 BUD31YCR063W 474 nt8.4□□□□□ -1.06
UBP3Q01477 YPT31YER031C 672 nt8.4□□□□□ -1.06 RIP-Chip
UBP3Q01477 HBS1YKR084C 1836 nt8.4□□□□□ -1.07
UBP3Q01477 MRN1YPL184C 1839 nt8.4□□□□□ -1.07
UBP3Q01477 CDC16YKL022C 2523 nt8.39□□□□□ -1.07
UBP3Q01477 SHO1YER118C 1104 nt8.38□□□□□ -1.07
UBP3Q01477 YER152W-AYER152W-A 567 nt8.38□□□□□ -1.07
UBP3Q01477 ADA2YDR448W 1305 nt8.37□□□□□ -1.07
UBP3Q01477 MFT1YML062C 1179 nt8.37□□□□□ -1.07
UBP3Q01477 JHD1YER051W 1479 nt8.37□□□□□ -1.07
UBP3Q01477 ARO3YDR035W 1113 nt8.36□□□□□ -1.07 RIP-Chip
UBP3Q01477 GLY1YEL046C 1164 nt8.36□□□□□ -1.07
UBP3Q01477 YHL030W-AYHL030W-A 462 nt8.36□□□□□ -1.07
UBP3Q01477 ORT1YOR130C 879 nt8.36□□□□□ -1.07 RIP-Chip
UBP3Q01477 YBR226CYBR226C 411 nt8.36□□□□□ -1.07
UBP3Q01477 NDE2YDL085W 1638 nt8.36□□□□□ -1.07
UBP3Q01477 WSC4YHL028W 1818 nt8.36□□□□□ -1.07
UBP3Q01477 ECM10YEL030W 1935 nt8.35□□□□□ -1.07 RIP-Chip
UBP3Q01477 STF1YDL130W-A 261 nt8.35□□□□□ -1.07 RIP-Chip
UBP3Q01477 SEM1YDR363W-A 270 nt8.35□□□□□ -1.07
UBP3Q01477 YNL190WYNL190W 615 nt8.35□□□□□ -1.07
UBP3Q01477 INP54YOL065C 1155 nt8.35□□□□□ -1.07 RIP-Chip
UBP3Q01477 TIM50YPL063W 1431 nt8.35□□□□□ -1.07
UBP3Q01477 POP2YNR052C 1302 nt8.34□□□□□ -1.07
UBP3Q01477 GRH1YDR517W 1119 nt8.34□□□□□ -1.07
UBP3Q01477 ORM1YGR038W 669 nt8.34□□□□□ -1.07
UBP3Q01477 YPR084WYPR084W 1371 nt8.34□□□□□ -1.07
UBP3Q01477 TDA4YJR116W 840 nt8.33□□□□□ -1.08
UBP3Q01477 RCF1YML030W 480 nt8.33□□□□□ -1.08
UBP3Q01477 TGL5YOR081C 2250 nt8.33□□□□□ -1.08
UBP3Q01477 HAL5YJL165C 2568 nt8.32□□□□□ -1.08 RIP-Chip
UBP3Q01477 YMR206WYMR206W 942 nt8.32□□□□□ -1.08
UBP3Q01477 PRE10YOR362C 867 nt8.32□□□□□ -1.08
UBP3Q01477 ALG7YBR243C 1347 nt8.31□□□□□ -1.08
UBP3Q01477 YIL168WYIL168W 384 nt8.31□□□□□ -1.08
UBP3Q01477 YNL140CYNL140C 570 nt8.31□□□□□ -1.08
UBP3Q01477 TIF3YPR163C 1311 nt8.3□□□□□ -1.08 RIP-Chip
UBP3Q01477 WSC3YOL105C 1671 nt8.3□□□□□ -1.08 RIP-Chip
UBP3Q01477 BIM1YER016W 1035 nt8.29□□□□□ -1.08 RIP-Chip
UBP3Q01477 INM1YHR046C 888 nt8.29□□□□□ -1.08
UBP3Q01477 YHR145CYHR145C 357 nt8.29□□□□□ -1.08
UBP3Q01477 MRP7YNL005C 1116 nt8.29□□□□□ -1.08
UBP3Q01477 YNL017CYNL017C 339 nt8.29□□□□□ -1.08
UBP3Q01477 GDH1YOR375C 1365 nt8.29□□□□□ -1.08
UBP3Q01477 ELP3YPL086C 1674 nt8.29□□□□□ -1.08
UBP3Q01477 MAM3YOL060C 2121 nt8.29□□□□□ -1.08
UBP3Q01477 ELP4YPL101W 1371 nt8.28□□□□□ -1.08
UBP3Q01477 MRP1YDR347W 966 nt8.28□□□□□ -1.08
UBP3Q01477 DPH5YLR172C 903 nt8.28□□□□□ -1.08
UBP3Q01477 snR4snR4 186 nt8.28□□□□□ -1.08
UBP3Q01477 BUD9YGR041W 1644 nt8.28□□□□□ -1.08
UBP3Q01477 LAS17YOR181W 1902 nt8.27□□□□□ -1.09 RIP-Chip
UBP3Q01477 GFA1YKL104C 2154 nt8.27□□□□□ -1.09 RIP-Chip
UBP3Q01477 TAD2YJL035C 753 nt8.27□□□□□ -1.09
UBP3Q01477 YCR049CYCR049C 447 nt8.26□□□□□ -1.09
UBP3Q01477 ELP6YMR312W 822 nt8.26□□□□□ -1.09
UBP3Q01477 ADE5,7YGL234W 2409 nt8.26□□□□□ -1.09
UBP3Q01477 RBS1YDL189W 1374 nt8.25□□□□□ -1.09
UBP3Q01477 SNP1YIL061C 903 nt8.25□□□□□ -1.09
UBP3Q01477 TDH1YJL052W 999 nt8.25□□□□□ -1.09
UBP3Q01477 PMU1YKL128C 888 nt8.25□□□□□ -1.09
UBP3Q01477 OST3YOR085W 1053 nt8.25□□□□□ -1.09
UBP3Q01477 Q0144Q0144 330 nt8.24□□□□□ -1.09
UBP3Q01477 HRA1HRA1 564 nt8.24□□□□□ -1.09
UBP3Q01477 BUD20YLR074C 501 nt8.24□□□□□ -1.09
UBP3Q01477 NDE1YMR145C 1683 nt8.24□□□□□ -1.09 RIP-Chip
UBP3Q01477 GDA1YEL042W 1557 nt8.23□□□□□ -1.09
UBP3Q01477 YOR343CYOR343C 327 nt8.23□□□□□ -1.09
UBP3Q01477 DUS3YLR401C 2007 nt8.23□□□□□ -1.09
UBP3Q01477 FRT1YOR324C 1809 nt8.22□□□□□ -1.09
UBP3Q01477 tL(UAA)B1tL(UAA)B1 84 nt8.22□□□□□ -1.09
UBP3Q01477 tL(UAA)B2tL(UAA)B2 84 nt8.22□□□□□ -1.09
UBP3Q01477 DST1YGL043W 930 nt8.22□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms