Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61GP60059 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SEC61GP60059 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SEC61GP60059 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61GP60059 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61GP60059 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61GP60059 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SEC61GP60059 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61GP60059 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61GP60059 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61GP60059 PKD1P6-201ENST00000343738 4769 ntBASIC14.31□□□□□ -0.12
SEC61GP60059 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61GP60059 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.31□□□□□ -0.12
SEC61GP60059 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61GP60059 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.31□□□□□ -0.12
SEC61GP60059 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SEC61GP60059 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SEC61GP60059 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61GP60059 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.3□□□□□ -0.12
SEC61GP60059 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61GP60059 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61GP60059 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61GP60059 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEC61GP60059 ABCB10P1-201ENST00000614297 2181 ntBASIC14.29□□□□□ -0.12
SEC61GP60059 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61GP60059 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SEC61GP60059 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61GP60059 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61GP60059 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61GP60059 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61GP60059 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61GP60059 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61GP60059 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61GP60059 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61GP60059 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61GP60059 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61GP60059 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61GP60059 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SEC61GP60059 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61GP60059 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61GP60059 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61GP60059 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61GP60059 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61GP60059 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC61GP60059 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61GP60059 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEC61GP60059 AL024507.2-201ENST00000606070 2574 ntBASIC14.25□□□□□ -0.13
SEC61GP60059 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61GP60059 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC61GP60059 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC61GP60059 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC61GP60059 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC61GP60059 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SEC61GP60059 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SEC61GP60059 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC61GP60059 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC61GP60059 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SEC61GP60059 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61GP60059 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.22□□□□□ -0.13
SEC61GP60059 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61GP60059 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SEC61GP60059 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61GP60059 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SEC61GP60059 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61GP60059 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61GP60059 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SEC61GP60059 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SEC61GP60059 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC14.21□□□□□ -0.14
SEC61GP60059 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SEC61GP60059 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61GP60059 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SEC61GP60059 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SEC61GP60059 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61GP60059 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61GP60059 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC61GP60059 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61GP60059 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SEC61GP60059 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61GP60059 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61GP60059 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
SEC61GP60059 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61GP60059 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61GP60059 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SEC61GP60059 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61GP60059 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SEC61GP60059 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61GP60059 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms