Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 ENT4YLL038C 744 nt8.58□□□□□ -1.04
CAF120P53836 NMD4YLR363C 657 nt8.58□□□□□ -1.04
CAF120P53836 MIX17YMR002W 471 nt8.58□□□□□ -1.04
CAF120P53836 NCE102YPR149W 522 nt8.58□□□□□ -1.04
CAF120P53836 GAL2YLR081W 1725 nt8.57□□□□□ -1.04
CAF120P53836 CYC3YAL039C 810 nt8.57□□□□□ -1.04
CAF120P53836 DSC2YOL073C 969 nt8.57□□□□□ -1.04
CAF120P53836 DCI1YOR180C 816 nt8.57□□□□□ -1.04
CAF120P53836 SHE9YDR393W 1371 nt8.57□□□□□ -1.04
CAF120P53836 TOK1YJL093C 2076 nt8.57□□□□□ -1.04
CAF120P53836 EDC2YER035W 438 nt8.56□□□□□ -1.04
CAF120P53836 IMO32YGR031W 1029 nt8.56□□□□□ -1.04
CAF120P53836 LYS12YIL094C 1116 nt8.56□□□□□ -1.04
CAF120P53836 YLR198CYLR198C 360 nt8.56□□□□□ -1.04
CAF120P53836 RPN8YOR261C 1017 nt8.56□□□□□ -1.04
CAF120P53836 SIR2YDL042C 1689 nt8.56□□□□□ -1.04
CAF120P53836 FSH1YHR049W 732 nt8.55□□□□□ -1.04
CAF120P53836 FAF1YIL019W 1041 nt8.55□□□□□ -1.04
CAF120P53836 YLR046CYLR046C 813 nt8.55□□□□□ -1.04
CAF120P53836 CSL4YNL232W 879 nt8.55□□□□□ -1.04
CAF120P53836 MRS6YOR370C 1812 nt8.54□□□□□ -1.04
CAF120P53836 YKL133CYKL133C 1392 nt8.54□□□□□ -1.04
CAF120P53836 YMR209CYMR209C 1374 nt8.54□□□□□ -1.04
CAF120P53836 YHR022CYHR022C 771 nt8.54□□□□□ -1.04
CAF120P53836 YMR075C-AYMR075C-A 366 nt8.54□□□□□ -1.04
CAF120P53836 ATG29YPL166W 642 nt8.54□□□□□ -1.04
CAF120P53836 TFB4YPR056W 1017 nt8.54□□□□□ -1.04
CAF120P53836 RRP1YDR087C 837 nt8.53□□□□□ -1.04
CAF120P53836 YAP6YDR259C 1152 nt8.53□□□□□ -1.04
CAF120P53836 TVP38YKR088C 1014 nt8.53□□□□□ -1.04
CAF120P53836 NDL1YLR254C 570 nt8.53□□□□□ -1.04
CAF120P53836 RTC4YNL254C 1206 nt8.53□□□□□ -1.04
CAF120P53836 SPE2YOL052C 1191 nt8.53□□□□□ -1.04
CAF120P53836 SET6YPL165C 1122 nt8.53□□□□□ -1.04
CAF120P53836 ISA2YPR067W 558 nt8.53□□□□□ -1.04
CAF120P53836 YHR219WYHR219W 1875 nt8.53□□□□□ -1.04
CAF120P53836 DLD3YEL071W 1491 nt8.52□□□□□ -1.05
CAF120P53836 ERG13YML126C 1476 nt8.52□□□□□ -1.05
CAF120P53836 PHB2YGR231C 933 nt8.52□□□□□ -1.05
CAF120P53836 ADH3YMR083W 1128 nt8.52□□□□□ -1.05
CAF120P53836 END3YNL084C 1050 nt8.52□□□□□ -1.05
CAF120P53836 POP4YBR257W 840 nt8.52□□□□□ -1.05
CAF120P53836 RPN9YDR427W 1182 nt8.51□□□□□ -1.05
CAF120P53836 FSH2YMR222C 672 nt8.51□□□□□ -1.05
CAF120P53836 RRT8YOL048C 1029 nt8.51□□□□□ -1.05
CAF120P53836 DSE3YOR264W 1293 nt8.51□□□□□ -1.05
CAF120P53836 YPR150WYPR150W 522 nt8.51□□□□□ -1.05
CAF120P53836 YLH47YPR125W 1365 nt8.5□□□□□ -1.05
CAF120P53836 MRP1YDR347W 966 nt8.5□□□□□ -1.05
CAF120P53836 YFR036W-AYFR036W-A 651 nt8.5□□□□□ -1.05
CAF120P53836 MGR3YMR115W 1506 nt8.49□□□□□ -1.05
CAF120P53836 RRP17YDR412W 708 nt8.49□□□□□ -1.05
CAF120P53836 RRT6YGL146C 936 nt8.49□□□□□ -1.05
CAF120P53836 ODC1YPL134C 933 nt8.49□□□□□ -1.05
CAF120P53836 SDH8YBR269C 417 nt8.49□□□□□ -1.05
CAF120P53836 SSL2YIL143C 2532 nt8.49□□□□□ -1.05
CAF120P53836 BRL1YHR036W 1416 nt8.48□□□□□ -1.05
CAF120P53836 VAC17YCL063W 1272 nt8.48□□□□□ -1.05
CAF120P53836 ERJ5YFR041C 888 nt8.48□□□□□ -1.05
CAF120P53836 MHO1YJR008W 1017 nt8.48□□□□□ -1.05
CAF120P53836 YLR412C-AYLR412C-A 207 nt8.48□□□□□ -1.05
CAF120P53836 OCA1YNL099C 717 nt8.48□□□□□ -1.05
CAF120P53836 COX11YPL132W 903 nt8.48□□□□□ -1.05
CAF120P53836 YFR045WYFR045W 930 nt8.47□□□□□ -1.05
CAF120P53836 RAI1YGL246C 1164 nt8.47□□□□□ -1.05
CAF120P53836 IDP3YNL009W 1263 nt8.47□□□□□ -1.05
CAF120P53836 YPL068CYPL068C 882 nt8.47□□□□□ -1.05
CAF120P53836 FCY1YPR062W 477 nt8.47□□□□□ -1.05
CAF120P53836 ITR2YOL103W 1830 nt8.47□□□□□ -1.05
CAF120P53836 SVF1YDR346C 1446 nt8.46□□□□□ -1.05
CAF120P53836 SAC7YDR389W 1965 nt8.46□□□□□ -1.05
CAF120P53836 YDR029WYDR029W 315 nt8.46□□□□□ -1.06
CAF120P53836 ADE8YDR408C 645 nt8.46□□□□□ -1.06
CAF120P53836 YMR181CYMR181C 465 nt8.46□□□□□ -1.06
CAF120P53836 YNL228WYNL228W 777 nt8.46□□□□□ -1.06
CAF120P53836 LSR1LSR1 1175 nt8.46□□□□□ -1.06
CAF120P53836 FES1YBR101C 873 nt8.46□□□□□ -1.06
CAF120P53836 YGR210CYGR210C 1236 nt8.45□□□□□ -1.06
CAF120P53836 EMC3YKL207W 762 nt8.45□□□□□ -1.06
CAF120P53836 KAE1YKR038C 1161 nt8.45□□□□□ -1.06
CAF120P53836 TAP42YMR028W 1101 nt8.45□□□□□ -1.06
CAF120P53836 KDX1YKL161C 1302 nt8.45□□□□□ -1.06
CAF120P53836 YHL008CYHL008C 1884 nt8.45□□□□□ -1.06
CAF120P53836 TGA1tA(UGC)A 73 nt8.44□□□□□ -1.06
CAF120P53836 tA(UGC)EtA(UGC)E 73 nt8.44□□□□□ -1.06
CAF120P53836 tA(UGC)GtA(UGC)G 73 nt8.44□□□□□ -1.06
CAF120P53836 tA(UGC)LtA(UGC)L 73 nt8.44□□□□□ -1.06
CAF120P53836 tA(UGC)OtA(UGC)O 73 nt8.44□□□□□ -1.06
CAF120P53836 YDR541CYDR541C 1035 nt8.44□□□□□ -1.06
CAF120P53836 CWP2YKL096W-A 279 nt8.44□□□□□ -1.06
CAF120P53836 YLR285C-AYLR285C-A 171 nt8.44□□□□□ -1.06
CAF120P53836 BTS1YPL069C 1008 nt8.44□□□□□ -1.06
CAF120P53836 RPD3YNL330C 1302 nt8.44□□□□□ -1.06
CAF120P53836 EEB1YPL095C 1371 nt8.44□□□□□ -1.06
CAF120P53836 TVP23YDR084C 600 nt8.43□□□□□ -1.06
CAF120P53836 RMD5YDR255C 1266 nt8.43□□□□□ -1.06
CAF120P53836 PTC7YHR076W 1032 nt8.43□□□□□ -1.06
CAF120P53836 YAL026C-AYAL026C-A 438 nt8.43□□□□□ -1.06
CAF120P53836 COG5YNL051W 1212 nt8.43□□□□□ -1.06
CAF120P53836 SLM4YBR077C 489 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 66.4 ms