Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YMR007WYMR007W 381 nt6.82□□□□□ -1.32
UFD1P53044 RCR1YBR005W 642 nt6.82□□□□□ -1.32
UFD1P53044 OLA1YBR025C 1185 nt6.82□□□□□ -1.32
UFD1P53044 WSC4YHL028W 1818 nt6.82□□□□□ -1.32
UFD1P53044 DIP5YPL265W 1827 nt6.81□□□□□ -1.32
UFD1P53044 RRT6YGL146C 936 nt6.81□□□□□ -1.32
UFD1P53044 SOD2YHR008C 702 nt6.81□□□□□ -1.32
UFD1P53044 OCH1YGL038C 1443 nt6.81□□□□□ -1.32
UFD1P53044 MET13YGL125W 1803 nt6.8□□□□□ -1.32
UFD1P53044 AQR1YNL065W 1761 nt6.8□□□□□ -1.32
UFD1P53044 YGR210CYGR210C 1236 nt6.79□□□□□ -1.32
UFD1P53044 YMR166CYMR166C 1107 nt6.79□□□□□ -1.32
UFD1P53044 KTR4YBR199W 1395 nt6.79□□□□□ -1.32
UFD1P53044 SMC5YOL034W 3282 nt6.78□□□□□ -1.32
UFD1P53044 SWM1YDR260C 513 nt6.78□□□□□ -1.32
UFD1P53044 HXT9YJL219W 1704 nt6.78□□□□□ -1.32
UFD1P53044 CAK1YFL029C 1107 nt6.77□□□□□ -1.33
UFD1P53044 RCF1YML030W 480 nt6.77□□□□□ -1.33
UFD1P53044 SGF73YGL066W 1974 nt6.77□□□□□ -1.33
UFD1P53044 RHO1YPR165W 630 nt6.76□□□□□ -1.33
UFD1P53044 PUP3YER094C 618 nt6.75□□□□□ -1.33
UFD1P53044 YGR137WYGR137W 375 nt6.75□□□□□ -1.33
UFD1P53044 YPL108WYPL108W 507 nt6.75□□□□□ -1.33
UFD1P53044 RSC9YML127W 1746 nt6.75□□□□□ -1.33
UFD1P53044 WSC3YOL105C 1671 nt6.74□□□□□ -1.33
UFD1P53044 RRT14YIL127C 621 nt6.74□□□□□ -1.33
UFD1P53044 MRP7YNL005C 1116 nt6.74□□□□□ -1.33
UFD1P53044 SHC1YER096W 1539 nt6.73□□□□□ -1.33
UFD1P53044 TGA1tA(UGC)A 73 nt6.73□□□□□ -1.33
UFD1P53044 tA(UGC)EtA(UGC)E 73 nt6.73□□□□□ -1.33
UFD1P53044 tA(UGC)GtA(UGC)G 73 nt6.73□□□□□ -1.33
UFD1P53044 tA(UGC)LtA(UGC)L 73 nt6.73□□□□□ -1.33
UFD1P53044 tA(UGC)OtA(UGC)O 73 nt6.73□□□□□ -1.33
UFD1P53044 YBL111CYBL111C 2004 nt6.72□□□□□ -1.33
UFD1P53044 ARO3YDR035W 1113 nt6.72□□□□□ -1.33
UFD1P53044 LSP1YPL004C 1026 nt6.72□□□□□ -1.33
UFD1P53044 FCY1YPR062W 477 nt6.72□□□□□ -1.33
UFD1P53044 ALG7YBR243C 1347 nt6.72□□□□□ -1.33
UFD1P53044 HXT8YJL214W 1710 nt6.71□□□□□ -1.34
UFD1P53044 THI73YLR004C 1572 nt6.71□□□□□ -1.34
UFD1P53044 YHL030W-AYHL030W-A 462 nt6.7□□□□□ -1.34
UFD1P53044 POB3YML069W 1659 nt6.7□□□□□ -1.34
UFD1P53044 EDC3YEL015W 1656 nt6.69□□□□□ -1.34
UFD1P53044 TOS2YGR221C 1869 nt6.68□□□□□ -1.34
UFD1P53044 YPT31YER031C 672 nt6.68□□□□□ -1.34
UFD1P53044 CKB1YGL019W 837 nt6.68□□□□□ -1.34
UFD1P53044 PMT1YDL095W 2454 nt6.68□□□□□ -1.34
UFD1P53044 CRN1YLR429W 1956 nt6.67□□□□□ -1.34
UFD1P53044 YDR306CYDR306C 1437 nt6.67□□□□□ -1.34
UFD1P53044 TIM50YPL063W 1431 nt6.66□□□□□ -1.34
UFD1P53044 HSM3YBR272C 1443 nt6.66□□□□□ -1.34
UFD1P53044 PRE10YOR362C 867 nt6.65□□□□□ -1.34
UFD1P53044 YPR084WYPR084W 1371 nt6.65□□□□□ -1.35
UFD1P53044 ICL2YPR006C 1728 nt6.64□□□□□ -1.35
UFD1P53044 AVL9YLR114C 2295 nt6.64□□□□□ -1.35
UFD1P53044 ACO1YLR304C 2337 nt6.64□□□□□ -1.35
UFD1P53044 PET18YCR020C 648 nt6.64□□□□□ -1.35
UFD1P53044 YER156CYER156C 1017 nt6.64□□□□□ -1.35
UFD1P53044 YLR030WYLR030W 792 nt6.64□□□□□ -1.35
UFD1P53044 ELP6YMR312W 822 nt6.64□□□□□ -1.35
UFD1P53044 BXI1YNL305C 894 nt6.64□□□□□ -1.35
UFD1P53044 PEX28YHR150W 1740 nt6.64□□□□□ -1.35
UFD1P53044 SNP1YIL061C 903 nt6.63□□□□□ -1.35
UFD1P53044 YJL160CYJL160C 864 nt6.63□□□□□ -1.35
UFD1P53044 TES1YJR019C 1050 nt6.63□□□□□ -1.35
UFD1P53044 PDC5YLR134W 1692 nt6.63□□□□□ -1.35
UFD1P53044 CDA1YLR307W 906 nt6.63□□□□□ -1.35
UFD1P53044 YMR206WYMR206W 942 nt6.63□□□□□ -1.35
UFD1P53044 RUP1YOR138C 2016 nt6.63□□□□□ -1.35
UFD1P53044 YER152W-AYER152W-A 567 nt6.62□□□□□ -1.35
UFD1P53044 APT1YML022W 564 nt6.62□□□□□ -1.35
UFD1P53044 VTS1YOR359W 1572 nt6.61□□□□□ -1.35
UFD1P53044 JHD1YER051W 1479 nt6.61□□□□□ -1.35
UFD1P53044 PRP2YNR011C 2631 nt6.61□□□□□ -1.35
UFD1P53044 TRR1YDR353W 960 nt6.61□□□□□ -1.35
UFD1P53044 PMU1YKL128C 888 nt6.61□□□□□ -1.35
UFD1P53044 MFT1YML062C 1179 nt6.61□□□□□ -1.35
UFD1P53044 RPS6AYPL090C 711 nt6.61□□□□□ -1.35
UFD1P53044 RPS6BYBR181C 711 nt6.61□□□□□ -1.35
UFD1P53044 TPO1YLL028W 1761 nt6.61□□□□□ -1.35
UFD1P53044 AGP2YBR132C 1791 nt6.61□□□□□ -1.35
UFD1P53044 MTC6YHR151C 1581 nt6.61□□□□□ -1.35
UFD1P53044 ADE17YMR120C 1779 nt6.6□□□□□ -1.35
UFD1P53044 MAL31YBR298C 1845 nt6.6□□□□□ -1.35
UFD1P53044 GNA1YFL017C 480 nt6.59□□□□□ -1.35
UFD1P53044 ATP2YJR121W 1536 nt6.59□□□□□ -1.35
UFD1P53044 ARG7YMR062C 1326 nt6.58□□□□□ -1.36
UFD1P53044 NMD5YJR132W 3147 nt6.58□□□□□ -1.36
UFD1P53044 RPL12BYDR418W 498 nt6.57□□□□□ -1.36
UFD1P53044 GRH1YDR517W 1119 nt6.56□□□□□ -1.36
UFD1P53044 YER137CYER137C 447 nt6.55□□□□□ -1.36
UFD1P53044 DST1YGL043W 930 nt6.55□□□□□ -1.36
UFD1P53044 HRA1HRA1 564 nt6.55□□□□□ -1.36
UFD1P53044 BUD20YLR074C 501 nt6.54□□□□□ -1.36
UFD1P53044 MNN9YPL050C 1188 nt6.54□□□□□ -1.36
UFD1P53044 AOS1YPR180W 1044 nt6.54□□□□□ -1.36
UFD1P53044 YKR018CYKR018C 2178 nt6.54□□□□□ -1.36
UFD1P53044 SGE1YPR198W 1632 nt6.54□□□□□ -1.36
UFD1P53044 MRP1YDR347W 966 nt6.53□□□□□ -1.36
UFD1P53044 GTS1YGL181W 1191 nt6.53□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms